| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6292 |
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| Symbol | |
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| ID | 6182733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 883153 |
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| End bp | 884262 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641689419 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001816278 |
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| Protein GI | 172065566 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.585328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00894017 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCAGGC ATCGCCTCGC TCTCCTCGCA GTCGCGTCCG CACTGCCGCT CGCGCTAGCC
GCGTGCAGCG GAAAAGCGCC TTCCGATCCG CGCACGGAAG CGCCGCTCGT GCGTACCGCC
GTCGTGCAGG CGGCCGTGCC CGCGTCCCGC ACGTTTACGG GAACCGTCGC CGCCCGTGTG
CAGAGCGATC TTGGGTTCCG GGTGTCCGGC AAGGTGCAGG AGCGGCTCGT CGATGCCGGT
CAAACCGTCC GGCGCGGCCA GCCGCTGATG CGGCTCGACC CCGTCGACCT GAAGCTCGCG
GCCCGCGCAC GCGACGAGGC CGTGGCCGCG GCGCGGGCCC GCGCGCGGCA GACCGCCGAG
GACGAAGCCC GCTACCGCGA CCTGCGCGGC ACCGGGGCGA TATCGGCGTC GGCCTATGAC
CAGATCAAGG CGGCGGCCGA TGCCGCGAAG GCGCAACTGA GTGCCGCCGA GGCCGACGCG
AACGTGTCGC GCAATGCGAC AGGCTATGCG GAACTCGTCG CGGACGGCGA CGGCGTCGTG
ATGGAAACGC TCGCCGAGCC CGGTCAGGTC GTCAGCGCGG GCCAGCCGGT GGTGCGGCTC
GCGCACGCCG GCAGCCGCGA GGCCGTGATC CAGCTGCCCG AAACCCTGCG CCCGGCGATC
GGGTCGAACG CGCAGGCCGA GCTGTTCGGC AAGCAGGACG CGAGCGTTCC TGCGACGCTG
CGCCAGCTCT CCGATACCGC GGATGCCAGA ACGCGCACGT TCGAAGCGCG CTATGTGCTG
CAGGGTGCGT TGGCCGGCGC ACCGCTGGGT GCGACCGTGA CGATCCGGAT CGCGGACGTC
GCGCCGCAAG CCGGCCTGCA GGTGCCGATC GGCGCGCTGC TCGATGCCGG CAAGGGCCCC
GGTGTATGGG TCGTCGCCGG CGATCCGGCC AGGGTTGCAT GGCGGCCGGT CAGGCTCGAG
CATCTGGATG ACGACAGCGC CCGCGTGTCC GGCGCGCTGA AGCAAGGCGA GCGCGTCGTC
GCACTCGGTG CCCACTTGCT GCGCGAAGGC GAGACGGTCC GCGTGTCGCC GCAGGCCGTC
GCGCTCGCAA GCGAAGGAGC ACGGCCGTGA
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| Protein sequence | MVRHRLALLA VASALPLALA ACSGKAPSDP RTEAPLVRTA VVQAAVPASR TFTGTVAARV
QSDLGFRVSG KVQERLVDAG QTVRRGQPLM RLDPVDLKLA ARARDEAVAA ARARARQTAE
DEARYRDLRG TGAISASAYD QIKAAADAAK AQLSAAEADA NVSRNATGYA ELVADGDGVV
METLAEPGQV VSAGQPVVRL AHAGSREAVI QLPETLRPAI GSNAQAELFG KQDASVPATL
RQLSDTADAR TRTFEARYVL QGALAGAPLG ATVTIRIADV APQAGLQVPI GALLDAGKGP
GVWVVAGDPA RVAWRPVRLE HLDDDSARVS GALKQGERVV ALGAHLLREG ETVRVSPQAV
ALASEGARP
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