| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6284 |
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| Symbol | |
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| ID | 6182725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 871827 |
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| End bp | 873605 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689411 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001816270 |
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| Protein GI | 172065558 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00160036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGGATCG AGGACTACGC GCTGATCGGC GACGGCCGCA GTGCCGCGCT CGTCGCGCGC
GACGGCAGCA TCGACTGGCT GTGCTGGCCG GACTTCGACT CGCCGCCATG CTTCGCCGCG
CTCGTCGGCA CGCCCGACAA CGGCCGTTTC CGCATTGCGC CGCGCGACGC GAATGCACGT
GCGGTGCGCC GCTATCTGCC CGGCACCGCG ATTCTCGAGA CGACCTTCGA AACGTCGTCG
GGCTGCATCG TGATCCTCGA CTGGATGAGC TGGAATACGG CCGATCCGTG CCTGATCCGC
AGCGTGCGCG GCGAGCGCGG CACGGTCGAG ATCGACGTCG ATCTCGGCGT GCGCTTCGAC
TACGGGCACG CGCTGCCGTG GTGCCGTCCG TTCGGCCGGC GCTGGCGGAT GATGACGGGT
GGCGACGCGA TGTGGCTCGA TACCGAGATG CAACTCGACG TGCAGGACGA CCGGCTCGTC
GGCTCGCAGC GGATCACGGC GGGCGAGCGC GTGGATTTCG CCATCAGCTA CGCGCGTTCG
TACGACCGGC CGCCGGTCGT GCCGGACGCC TACGCGTCGG TGCGCGATAC GCAGTCGTTC
TGGCGCGGCT GGGTGACGTG CAACACGGCG GAAGGTCCGT ATCGCGACGC GATCGAGCGT
GCGCTGATCA CGGTGAAGCT GCTGTCGAGC CTGCGCACCG GCGGCATCGT CGCGGCGCCC
ACCACTTCGC TGCCCGAACG TTTCGGCGGC CAGCGCAACT GGGATTACCG GTTCTGCTGG
CTGCGCGACG CGAGTTTCAC GCTGCGCGCG CTGGTGCGCT GCGGATACCG CGAAGAGGCC
GCGCGCTGGC GCGACTGGCT GGTGCGCGCG ATCGCCGACC ATCCGTCGCA ATTGCAGGTG
CTGTATGCGG CCGACGGCGG CCGCCGCGCG GCGGAATGGA CCGCCCCGCA TCTGGCCGGC
TACGAAGGTG CGCAACCGGT GCGCTTCGGC AACGCGGCGG CCCTGCAGCT GCAGCTCGAC
GTGTACGGCG AGGTGCTGGG TGCGCTGTAC CATGCGCGCC GCCACGGCTT GCCGCCCGAC
GACGACGTGT GGATGCTCGA ACGGCGGCTG ATCGAGCATC TCGCGACGGT CTGGCGCGAC
CCCGACGAAG GGATCTGGGA AGTGCGCAGC GGTCGACACC TGTTCACGTC GTCGAAGGTG
ATGGTGTGGG CGGCGGTCGA AAGCGCGTGC CGCTCGGCGC GCGCTTTCGG TCATCACGCG
CCGCTCGACG TGTGGCAGCG CTGGGCCGAT GCGATTCGCG ACGATGTGCT CGCACGCGGT
TACCACGAGC AACTCGGCCG CTTCGTCGAG CGCTACGACG GCGACGGGCT CGACGTGAGC
CTGTTGCTGA TTCCGTTGAC GGGCATGCTC GACGCGTGCG ATCCGCGGGT GGTCGGCACC
GTTGCCGCGA TCGAGCAGGA ATTGCTGGAG GACGGACTGC CGTTCCGCTA TCGGCCGCAG
CCATTCAACG ACGGCTGCGA AGGCGACGAA GGCGCGTTCG TCACGGCCGG TTTCTGGCTC
GTGCAGGTGT ACCGGATGCA AGGCCGCGAC GACGATGCGC TCGCGCTGTT CGAACGGCTG
CTGAGCCTGC GCAACGACGT CGGGCTGCTG GCCGAGGAAT ACGACGTGAA CGCGCGGCGC
CTGTGCGGAA ATTTCCCGTT CACGCTCGCG CAGGTCGGGT TGATCAACGC GGCGCTCGCG
CTGCAGGGCG ACGGAAGGGA CGACGTCGAT ATCGGCTGA
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| Protein sequence | MRIEDYALIG DGRSAALVAR DGSIDWLCWP DFDSPPCFAA LVGTPDNGRF RIAPRDANAR
AVRRYLPGTA ILETTFETSS GCIVILDWMS WNTADPCLIR SVRGERGTVE IDVDLGVRFD
YGHALPWCRP FGRRWRMMTG GDAMWLDTEM QLDVQDDRLV GSQRITAGER VDFAISYARS
YDRPPVVPDA YASVRDTQSF WRGWVTCNTA EGPYRDAIER ALITVKLLSS LRTGGIVAAP
TTSLPERFGG QRNWDYRFCW LRDASFTLRA LVRCGYREEA ARWRDWLVRA IADHPSQLQV
LYAADGGRRA AEWTAPHLAG YEGAQPVRFG NAAALQLQLD VYGEVLGALY HARRHGLPPD
DDVWMLERRL IEHLATVWRD PDEGIWEVRS GRHLFTSSKV MVWAAVESAC RSARAFGHHA
PLDVWQRWAD AIRDDVLARG YHEQLGRFVE RYDGDGLDVS LLLIPLTGML DACDPRVVGT
VAAIEQELLE DGLPFRYRPQ PFNDGCEGDE GAFVTAGFWL VQVYRMQGRD DDALALFERL
LSLRNDVGLL AEEYDVNARR LCGNFPFTLA QVGLINAALA LQGDGRDDVD IG
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