| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6282 |
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| Symbol | |
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| ID | 6182723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 868635 |
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| End bp | 869735 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641689409 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001816268 |
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| Protein GI | 172065556 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.757548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00438042 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACTTT CCGACGCGCC GGCGATCGAC GACGTGCGCG CCCGCGCCTA CCGCGTGCCG
ACCGACCGGC CCGAAGCCGA CGGCACCTTC GCATGGCACG CGACGACGAT CGTCGTCGTC
GAGATCGATG CGGGGCCCGT GACGGGGCTC GGCTATACGT ACACCGATGC GAGCGCGGCG
CTGCTCGCGA AGTCGATGCT GGCCGACGTG CTGCGCGAGC GGCCGCTCGT CGATATCCCG
GCCGCCGTCG ACGCGCTGTG GCGCGCGGTG CGCAACGTCG GGCGGGCCGG CGTCGCGGCG
ACCGCGATTT CCGCACTCGA CGTCGCGCTG TGGGATGCGA AGGCGAAGCT CGCGGGCGTG
CCGCTCGCGA TCCTGCTCGG CCGCGTGCGC GAACGCGTGC CCGTGTACGG CAGCGGCGGC
TTCACGACCT ACGACGACGC GACGCTCGCC GCGCAGCTCG ACGGCTGGCG CAACGAACAC
ATCCGCGCGT GCAAGATCAA GATCGGCGCG CAGGATGCGC GCGATCCGTC GCGCGTGCGG
GTCGCGCGCG CCGCGCTCGG CCCCGACGTC GATCTGTTCG TCGATGCGAA CGGCGCGTAT
GCGGCGCGCA CCGCGCTCGC GTTTGCGGAG AGCGTCGCTG ATTGCGCGAT CCGCTGGTTC
GAGGAGCCGG TCAGCAGCGA CGATATCGAC GGCTTGCGCT TCGTGCGCGA GCACGTCGGC
GCGTGCGTCG ACGTCGCGGC CGGCGAGTAC GCATATACGC CCGACGACTT CCGGCGCCTG
CTCGAAGGCC GCGCGGTCGA CGTGCTGCAG GCCGATGCGA CACGCTGCGG CGGCGTCAGC
GGCTTTCTCG CGGCCGCCGC GCTGGCCGAT GCGCATCACG TCGACCTGTC CGCGCATTGC
GCGCCGGCGC TGCACCGGCA GGTCGGCTGC GTCGCGCCGC GCATGCGCCA CGTCGAATGG
TTCCACGATC ATGTGCGGAT CGAGCGAATG ATGTTCGACG GCGCGCCGAC CGTCGTCGAC
GGCGCACTCG AGATCGATGC CGCGCGCCCC GGGCTCGGCC TCGAGTTGCG CGAGGCCGAC
GTCGCGCAGT TCGCGATCTG A
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| Protein sequence | MALSDAPAID DVRARAYRVP TDRPEADGTF AWHATTIVVV EIDAGPVTGL GYTYTDASAA
LLAKSMLADV LRERPLVDIP AAVDALWRAV RNVGRAGVAA TAISALDVAL WDAKAKLAGV
PLAILLGRVR ERVPVYGSGG FTTYDDATLA AQLDGWRNEH IRACKIKIGA QDARDPSRVR
VARAALGPDV DLFVDANGAY AARTALAFAE SVADCAIRWF EEPVSSDDID GLRFVREHVG
ACVDVAAGEY AYTPDDFRRL LEGRAVDVLQ ADATRCGGVS GFLAAAALAD AHHVDLSAHC
APALHRQVGC VAPRMRHVEW FHDHVRIERM MFDGAPTVVD GALEIDAARP GLGLELREAD
VAQFAI
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