Gene BamMC406_6278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6278 
Symbol 
ID6182719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp864973 
End bp865365 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content71% 
IMG OID641689405 
Producthypothetical protein 
Protein accessionYP_001816264 
Protein GI172065552 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00531992 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCCGT TCACTCGTCG CCCGATGCGC AAACCCCGGC ACCGCGCGGC CTGCGCGCTG 
CTGGTGGCGG CCGTTGCCGC GCTGCCGGCG TGGGGCCAGT TGCGCCCGCC GGCCCCCGCG
GCCGTTGCCG ACATGCCGAC TCAAGCGTAC AAGCGCGCGG ACCACCGGAT GATGGAAGCG
ATGGAAACCG CGCCGTACAC CGGCGACGCC GATCGCGATT TCGTCGCGCA CATGACGCCG
CACCACCAGG GCGCGATCGA CATGGCGCAG GTCGAGCTGA AATACGGCAA GGACCCGACG
CTGCGCAAGC TCGCGCGCCG CATCATCGCC GCGCAGCGCG ACGAGATCGC GCTGATGGAG
CGCTGGCAGA AGGAGCACGG CGCGGCGCCG TGA
 
Protein sequence
MDPFTRRPMR KPRHRAACAL LVAAVAALPA WGQLRPPAPA AVADMPTQAY KRADHRMMEA 
METAPYTGDA DRDFVAHMTP HHQGAIDMAQ VELKYGKDPT LRKLARRIIA AQRDEIALME
RWQKEHGAAP