Gene BamMC406_6277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6277 
Symbol 
ID6182718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp864034 
End bp864774 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID641689404 
ProductFRG domain-containing protein 
Protein accessionYP_001816263 
Protein GI172065551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00667411 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGACGTG AACGACGCGT GATGGACCAC ACGATCGACA GTGTCGCCGA CTATATGGCC 
GCGATCGGCG CGGCGCAGGC TACCACGGCC TCGCGGCTGT TCCGCGGGCA GTGCAACGCC
GGCTGGCCGC TCGTGCCGAG CATCGCGCGT CAGCGCGCAT CGCCGGACGT GGAAGCGCAA
ATGCTCGACG AATTCACGCG GCGCGCGCTG CCGCATCTCG ATCCGGCCCC GAACCTCGAT
GCGTGCGACT GGCTCGCGCT CGCCCAGCAG CACGGCATGC GCACGCGGCT GCTCGACTGG
TCCGGCAACG CGCTGGCCGC GCTGTGGTTC GCGGTCAGGA GCGAGAACGG GATCGGGGCC
GACGGCGCGG TGTGGTGCCT GTCGCACGAT GCCGAGGACA TCGCGACCGC GGCCGAGCGC
CACGCGCCGT TGCAGGTGAC GTGCACCAAG GTGTTCCGGC CGCGTCACGT GATGCCGAGG
ATTACCGCGC AGGACGGCTG GTTCACGATC CACCGCTACG ACGCCCACGC GCAGGGTTTC
GCGCCGCTCG ACGAGGATCC GGACCTGGCC GGGCGCCTGG TCCGCATCGT CGTGCCGGGC
GACCGCTTCG GTGCGATCCG CCGCGAACTG GCCGGCCTCG GCGTCAGCAT CGGCACGATC
TTCCCGGACC TCGACGGCAT TGCGCAACTA ACGGACATCC GCTTTTTCCC CGACGACGAG
GATACGCATG CGCCACGGTG A
 
Protein sequence
MGRERRVMDH TIDSVADYMA AIGAAQATTA SRLFRGQCNA GWPLVPSIAR QRASPDVEAQ 
MLDEFTRRAL PHLDPAPNLD ACDWLALAQQ HGMRTRLLDW SGNALAALWF AVRSENGIGA
DGAVWCLSHD AEDIATAAER HAPLQVTCTK VFRPRHVMPR ITAQDGWFTI HRYDAHAQGF
APLDEDPDLA GRLVRIVVPG DRFGAIRREL AGLGVSIGTI FPDLDGIAQL TDIRFFPDDE
DTHAPR