| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6274 |
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| Symbol | |
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| ID | 6182715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 861044 |
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| End bp | 862426 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689401 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001816260 |
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| Protein GI | 172065548 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0399198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATG CGACCCTGTT CCCGTTGTCC ATTCATGAGC GATTCCGCGT CGTGCTGCGC
CGCGCGTTCA CGCCGGGACG ACGCGGTGCG CGGATGCTGC CGGCAGGTAT CCCGATCCCA
TACGCGGACG CAGCATCTAC GGAGCTTGCA CCGCCCACCG TCACCCGCGC CGGCGACGGC
AACGCCGACA GCGGCCACGG CGGGCGCACC GGAGCCGGCC GCCACGACGA ACGCGACACC
GACGCACCGG GCGGCGGCGG GGGCGACGGC CATCCGCACG ACGATCGCGG TGGCCGCACC
GGCGGCGATG GCGACGGCGG CAACGGCGCA GGCGAAGGCG AACGCAAGCG GCCGGGCAAG
AAGCCGTTGA TCATCCTCGG CGCGGTGGCG GTCGTGCTGG TGATCGCCGG GCTCGTGTGG
TGGCTCGCGA CGCGCAACCA GGAAAGCACC GACGACGCGT ACACGGACGG CAACGCGGTG
GCCGTCGCGC CGCATGTATC CGGCTACGTG ACACGGCTCG CCGTCGACGA CAACACGTAC
GTGCACCGCG GCGACGTGCT GGTCGAGATC GATCCGCGCG ACTATCGTGC GCAAGTCGAC
GCGGCGCGCG CGCAACTCGG CCTCGCGCAG GCGCAGCTCG ACGCGTCGCG GGTGCAGCTC
GACATCGCGC ACGTGCAATT CCCGGCCCAG TACAAGCAGG CGCGGGCACA GATCGAATCG
GCGGAGGCCG CGTACCGGCA GGCGCTCGCC GCGCAGGAGC GGCAGCGTGC GGTCGATGCG
CGCGCAACCT CGCAGCAGGC GATCGACGCG GCCGACGCGC AGCGGGCGAG CGCCGATGCA
AACGTCGCGA TGGCGCAAGC GCAGGCACGC ACCGCGAGCC TCGTGCCGCA GCAGATCCGC
CAGGCCGAAA CGGCCGTCGA GGAGCGTCGC CAGCAGGTAC TGGCGGCACG TGCGCAGCTC
GATACGGCGA ATCTCAACCT GTCGTACTGC GAAGTGCGCG CACCGTCCGA CGGCTGGGTC
ACGCGCAGGA ACGTTCAACT CGGCTCGTAC CTGCAAGCCG GCGCGTCGGT CTTCTCGGTC
GTCACGCCGC GCGTATGGAT CACCGCGAAC TTCAAGGAAT CCCAACTGGA GCGGATGCGC
ATCGGCGATC GCGTCGACGT GTCGGTCGAC GCGTATCCCG ATCTCGACCT GCACGGTCAC
GTCGACAGCA TCCAGCTCGG CAGCGGCGCA CGCTTCTCCG CGTTTCCGGC CGAGAATGCG
ACCGGCAACT TCGTGAAGAT CGTGCAGCGC GTGCCCGTGA AGATCGTGCT CGACGGCCCG
CTGCCGAACA ATCCGCCACT CGGTCTCGGC CTGTCGGCCG AACCGACCGT GCACCTGAAA
TGA
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| Protein sequence | MPDATLFPLS IHERFRVVLR RAFTPGRRGA RMLPAGIPIP YADAASTELA PPTVTRAGDG
NADSGHGGRT GAGRHDERDT DAPGGGGGDG HPHDDRGGRT GGDGDGGNGA GEGERKRPGK
KPLIILGAVA VVLVIAGLVW WLATRNQEST DDAYTDGNAV AVAPHVSGYV TRLAVDDNTY
VHRGDVLVEI DPRDYRAQVD AARAQLGLAQ AQLDASRVQL DIAHVQFPAQ YKQARAQIES
AEAAYRQALA AQERQRAVDA RATSQQAIDA ADAQRASADA NVAMAQAQAR TASLVPQQIR
QAETAVEERR QQVLAARAQL DTANLNLSYC EVRAPSDGWV TRRNVQLGSY LQAGASVFSV
VTPRVWITAN FKESQLERMR IGDRVDVSVD AYPDLDLHGH VDSIQLGSGA RFSAFPAENA
TGNFVKIVQR VPVKIVLDGP LPNNPPLGLG LSAEPTVHLK
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