| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6267 |
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| Symbol | |
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| ID | 6182822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 854555 |
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| End bp | 855391 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689394 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001816253 |
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| Protein GI | 172065541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.526143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG ATCGAATTTC CTATGACGCA TTCCTGCGGT TTCTGGCGAT GCCGCTGAAC
GACGGCCGCC CGTTCGTGCT CGAGACCAAG CACACGGTCT CGCTGCACTT CGACCACTTC
GGCACGCAGA GCTTCATGTC GCTGAAGGAT CCGGTCCGTC TCGAACTCGG CTATACGCGC
GTGATGATGG GTTTCCTGCT GCTGCAGCCG GCGCCCGCGC GCATCTGCAT GATCGGGCTC
GGTGGCGGAT CGCTGGCGAA GTACTGCTAT CGCCACCTGC CCGATACGGC GATCGACGCG
GTCGAGATCA ACCCCGACGT GATCGCGCTG CGCGACGTGT TCAGGATTCC GCAGGACGAC
GCGCGCTTCG CCGTGATCTG CGCGGATGGC GCGGACTACG TCGGCCGGCC GGAAGTAAAG
GCGGACGTGA TCCTGCACGA CGCGTTCGTC GCCGACGGCA TGCCGGGCCG CTGCACGGGC
ACTGCCTTTT TCGACGCGTG CCGCGCGCGG CTGAGCGAAA CGGGCGTGCT CGCGATCAAC
TTCATGGACG ACGATCCGGC GTTGCCGCGG CATCTCGCGC AATTGCGCGA GGTGTTCGAC
GCTTCGTATG CGCTGCTGCC GTGCGGCGAC GACAACAACT TCATCGCGTT CGCGTGGAAG
AACGGCAACC CGCTGCCGTC GCTGCGCATC CTGCTCGAAC GCGCGCTCGG GTTTGCGTCG
GCCGGCGAGC TCAAGCTGTC GCCCACCGCG CGGCGCATGA AGGAAGGGGA GTGCATCGCT
CCCGAGCGGC TCGTGTGGCG CGCGCGCGAA CATGCGCGAT GGGAAATCTG CACCTGA
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| Protein sequence | MSEDRISYDA FLRFLAMPLN DGRPFVLETK HTVSLHFDHF GTQSFMSLKD PVRLELGYTR
VMMGFLLLQP APARICMIGL GGGSLAKYCY RHLPDTAIDA VEINPDVIAL RDVFRIPQDD
ARFAVICADG ADYVGRPEVK ADVILHDAFV ADGMPGRCTG TAFFDACRAR LSETGVLAIN
FMDDDPALPR HLAQLREVFD ASYALLPCGD DNNFIAFAWK NGNPLPSLRI LLERALGFAS
AGELKLSPTA RRMKEGECIA PERLVWRARE HARWEICT
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