Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6257 |
Symbol | |
ID | 6182812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 845880 |
End bp | 846533 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641689384 |
Product | nitrile hydratase |
Protein accession | YP_001816243 |
Protein GI | 172065531 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.416291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.795432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGCT TTCACGACCT CGGCGGATTC CAGGGCTTCG GCCAGGTGCC GCACACGATC AACAGCCTCG GCTACAAGCC GGTCTTCAAG GAAGACTGGG AACATCTCGC ATACAGCTTG ATGTTCGTCG GTGTCGATCA ATTGAAAAAG TTCAGCGTCG ACGAAGTGCG TCACGCGGTC GAACGGATCG AAGTGCGCCA GCATGTCGGC ACGCGCTACT ACGAACGCTA CGTGATCGCG ACCGCGACGC TGCTCGTCGA AACCGGCGTG CTGACGCAGG ACGAACTCGA CCGCGCGCTC GGTTCGCACT TCCGGCTCGC GAATCCGTCG CATTCCGTCG GCCGGGCGGC GCCCGCCGGC GCGACGCGGT TCGAAGTCGG CGATCGCGTC GTCGTGCGCG ACGAATACGT GAGCGGACAC GTCCGGGCAC CGGGCTACGT GCGAGGAAAG GCAGGCGTCG TGCTGCACCG GACGACCGAA TCGTGGCCGT TCCCGGACGC GATCGGTCAC GGCGACACCG GCGCCGCGCA TCAGCCGACC TATCACGTCG AATTCCGCGT GAGGGATCTG TGGGGCGACG CCGCCGACGA CGGTTATGTC GTGGCCGATT TGTTCGAAGG CTACCTGGAT CGCGCGCCGG AGACGCGCGC ATGA
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Protein sequence | MDGFHDLGGF QGFGQVPHTI NSLGYKPVFK EDWEHLAYSL MFVGVDQLKK FSVDEVRHAV ERIEVRQHVG TRYYERYVIA TATLLVETGV LTQDELDRAL GSHFRLANPS HSVGRAAPAG ATRFEVGDRV VVRDEYVSGH VRAPGYVRGK AGVVLHRTTE SWPFPDAIGH GDTGAAHQPT YHVEFRVRDL WGDAADDGYV VADLFEGYLD RAPETRA
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