| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6253 |
|---|
| Symbol | |
|---|
| ID | 6182808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 841800 |
|---|
| End bp | 842510 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641689380 |
|---|
| Product | MgtC/SapB transporter |
|---|
| Protein accession | YP_001816239 |
|---|
| Protein GI | 172065527 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1285] Uncharacterized membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.160487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.927456 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCGA TGCCGGTCGT ACTTCACTGG ACCGATGCTC TCCTCAGGAT TGCGCTGGCG
CTCGTCGCGG GCGGGCTGGT CGGCCTCGAT CGCAGTGAAG CCGGCAAGAC GGCCGGGCTG
CGCACGACGA TCCTCGTCTG CCTCGCCGCG TGCCTGGCGA TGCTGCAGGT GAATGCGCTG
CTGATGCAGG CCGGCAAGCC GGACGGCGCG TTTGCGGTGA TCGACCCGAT GCGGCTGCCG
CTCGGCATCC TGACCGGGAT GGGCTTTATC GGCGGGGGCG CAATCCTGCA TCGCGACGGC
CTCGTCTCCG GCGTGACCAC GGCAGCGACG CTGTGGTTCG TCACGATCAT CGGACTGTGC
ATCGGCGGCG GCCAGTTGTC GCTCGGCGCG CTCGGGCTCG TGCTCGCATT GCTCGTCGTG
TGGCCGCTGC GGCTGGTCGA GGAACGGCTG CGCGGCGTCA GGACTGCGCG GGTCACGGTC
GAATACGAAC TCGGCTCGAC GGCGCGCGAG CGGCTGACGA CCCGGCTGCA CGCCGCGGGA
TTCACGTGCC GCACGCGCGG CTTTCACGAA TCGGTCGCGC GTGCGCTGCG CGAGGAAGAG
CTGCTCGTGC AGTGGCGCGA GCAGGCCAAC ACCGACGTGA TGCTGCCGCA ACTGATCCGG
ACTCTCGAGT CGGCCGGGCT GACGTCGGTC CGCTTTTCAT CGGAGAACTG A
|
|---|
| Protein sequence | MEPMPVVLHW TDALLRIALA LVAGGLVGLD RSEAGKTAGL RTTILVCLAA CLAMLQVNAL
LMQAGKPDGA FAVIDPMRLP LGILTGMGFI GGGAILHRDG LVSGVTTAAT LWFVTIIGLC
IGGGQLSLGA LGLVLALLVV WPLRLVEERL RGVRTARVTV EYELGSTARE RLTTRLHAAG
FTCRTRGFHE SVARALREEE LLVQWREQAN TDVMLPQLIR TLESAGLTSV RFSSEN
|
|---|
| |