Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6252 |
Symbol | |
ID | 6182807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 839552 |
End bp | 841744 |
Gene Length | 2193 bp |
Protein Length | 730 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641689379 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001816238 |
Protein GI | 172065526 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.996582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGCCG ATCATTTCGT CCAGTTCTAC GAATCCGACG AGCAGCTCGT GTCGGAGGTC GCGTCGTTCG CGGCCGATGC GTTGCGCGAC GGCGGCAGCG CGATCGTGAT CGCGCGGGCC GACCGGCTCG CGGCGGTGCA CGAACGCCTG GATGGGCTCG GCACGGCCAT CGGCGCCGCG GCCCGCGACC GGATCTTCAT GTCGAGCGCG CAGGCGCTGC TCGACAGCTT CATGGACGGC GATCTGCCCG ATCCGGCGCG CTTTCGCCGC TCGATCGGCC CGATCGTCGA AGCCGCGGTC CGCGCCGGCC GGCCCGTGCA TGCGTTCGGA GAAATGGTCT CGCTGCTGTG CGCGCAGGAC CGGTACGCCG GGGCCCTGCG ACTGGAAGCG TTATGGGACG AACTGATCGC GCGGTACCGC TTCTCGCTCT ACTGCGGCTA TTCGCATGAC GCGTTTCCGA GCGCCGAGCA GTCGGAGATG TTCCGCCACG TGTGCTCGCT GCACCGCCGC ATCCTGCCCG CCGCGTCGCT GCGCAACGAC GAAAACGAGC TGCACCTGAC GCTGGCGCTG TCCCAGCAAC GCTCGCGCGC ACTGAGCGAC GAGATCCGCC GCCGCGAGGA CGCCGAACAG CAACGCAACG GCGTGCTGAT GCATGCGCCG TTGCCGATCG CGCTGCTGTC GGGCCCGGAG CACCGGATCG TGCTCGCGAA TCACCGCTTC TCCGCGCTGT GCGGCCGGAC CGACATCGTC GACCGGCCGC TGACGTCGGT GCTGCCCGGC GGCGACACGC CCGCAATCGT GCAGGCGCTT GAAACCGCCC GCGAGCAAGG CTGCTCGACG ACGATCGGCG AGCACCACGA CCGGCCCGAA CCGGACGGCG CCGCCCGCGT GTACCGGCTG CATTTCAATC CGCAGCCGCT CGCCGAGGGG CTCGGCGTGA TCGTCAGCGC GGTCGAGGTG ACCGAGCACG TCGCCGCGCG CGAGAAGCTC GTCGCCGCGA ATGCCGAGCG CGACCGGCTG CTGGGCGAAC TGCGCGACGC GAACCAGGCG AAGGACCAGT TTCTCGCGGT GCTCGGCCAC GAGCTGCGCA ATCCGCTGAC GCCGATCTCG CTCGCGCTCG AGCTGATCCG CAACCGCGAC GGCCAGGCGA CGCCGAACGA GATCGCGATC ATCCAGCGGC AGCTCGATCA CATGGTCCGG CTGATCGACG ACCTGCTCGA CGTGTCGCGC ATCACGCGCG GCAAGATCAC GCTGAAGAAG GAATCCTTGC GGCTCGCGGA CATCGTCGAC CGCGCGGTCG AGGTCGCCAG CCCGCTGCTC GAGCAGCGCC GTCACCGCCT GCATGTCGAC GCCGATCCCG ACGCGCGCTG CCACGGCGAC CCCGTACGGC TGTCGCAGGT GGTCGCGAAC CTGCTGACCA ACGCGGCGAA ATACACGATG CCGGGCGGCG ACATCACCGT GCGCGCGACG CACGGCGCGG ACGGCGCCGC GATCATCGAG GTTTGCGACA ACGGCGCCGG CATTCCGCCC GACCGCCTCG ACAGCATCTT CGAGCCGTTC TACCGGCTCG ACGGCGAAAC GAAGCAGGCG CACGGCGGCC TCGGCATCGG CCTCGCACTC GTGCGCAGCC TCGTGAACCT GCATGGCGGC ACGGTGCGCG CGGACAGCGC CGGCCCCGGC TGCGGCAGCA CGTTTACGAT CGCGCTGCCC GAATACCGGC CGAAAGCCGT GGCGGTGGTC ACGCCGCAGC CGCCGCCGGG CATCCGCGAG TTGGCGCCGG GCAGCACGGG CCGGCGCGTG ATGCTGGTCG ACGACAACGA GGATGCCGCG TCGACGCTCG CGCAATGGCT GCGTGACGCC GGCCACGAAG TCGCCGTCGT GCACGACCCG GTGACCGCGC TGGCCGCCTA CCGCGCGTAC CGTCCCGACG TCGCGATCCT CGATATCGGG CTGCCGGTGA TGGACGGCTA CGAGCTGCTG CGGCGGCTGA AGGCGATCAA CGAAGTCACG ACGTGCATGT TCCTCGCGCT GACCGGTTAT GGCCGCAGCG CGGATCGCGA GCGCTGCCTC GCCACCGGGT TCCTGCAGCA CTTCGTGAAG CCGGTCGATC CGGCCGCGCT GCATCTCGCG ATGATGCTGC CCCGGCCGGG CGGCGATGCA CACGACGGCA CGGGCGCCGA AGCCGGACGC TGA
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Protein sequence | MRADHFVQFY ESDEQLVSEV ASFAADALRD GGSAIVIARA DRLAAVHERL DGLGTAIGAA ARDRIFMSSA QALLDSFMDG DLPDPARFRR SIGPIVEAAV RAGRPVHAFG EMVSLLCAQD RYAGALRLEA LWDELIARYR FSLYCGYSHD AFPSAEQSEM FRHVCSLHRR ILPAASLRND ENELHLTLAL SQQRSRALSD EIRRREDAEQ QRNGVLMHAP LPIALLSGPE HRIVLANHRF SALCGRTDIV DRPLTSVLPG GDTPAIVQAL ETAREQGCST TIGEHHDRPE PDGAARVYRL HFNPQPLAEG LGVIVSAVEV TEHVAAREKL VAANAERDRL LGELRDANQA KDQFLAVLGH ELRNPLTPIS LALELIRNRD GQATPNEIAI IQRQLDHMVR LIDDLLDVSR ITRGKITLKK ESLRLADIVD RAVEVASPLL EQRRHRLHVD ADPDARCHGD PVRLSQVVAN LLTNAAKYTM PGGDITVRAT HGADGAAIIE VCDNGAGIPP DRLDSIFEPF YRLDGETKQA HGGLGIGLAL VRSLVNLHGG TVRADSAGPG CGSTFTIALP EYRPKAVAVV TPQPPPGIRE LAPGSTGRRV MLVDDNEDAA STLAQWLRDA GHEVAVVHDP VTALAAYRAY RPDVAILDIG LPVMDGYELL RRLKAINEVT TCMFLALTGY GRSADRERCL ATGFLQHFVK PVDPAALHLA MMLPRPGGDA HDGTGAEAGR
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