| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6247 |
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| Symbol | |
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| ID | 6182381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 834314 |
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| End bp | 835147 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689374 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001816233 |
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| Protein GI | 172065521 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.82231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC AGTACGCGGT GATCGGCAAC CCGATCGGAC ACACGAAATC TCCGCTGATC
CACGGCATCT TCGCGCAAGC GTCGCGGCAG GACCTGCACT ACTCGGCCAT CGAAGGGCCG
CTCGAGCCGG AAGGCGCGTT CGTCGACGTG GTGCGGGCAT TCGCCGCGCG CGGCGGCAAA
GGCATCAACA TCACCGCCCC GTTCAAGCTC CAGGCGTTCG CGATGTCGGA CGAACGCAGC
GAGCGCGCCG CGCTCGCCGG CGCGGCCAAT GCGCTGAAGT TCGAAGGCGG ACGCATCCTG
GCCGACAACT TCGACGGGAT CGGGCTCGTG CGCGACATCG AAATCAATCT CGGCCTGCCG
ATGGCCGGCA AACGCGTGCT GATGCTCGGC GCCGGGGGCG CGGCGCGCGG CGCCCTGCTC
CCGTTCCTCG CGGCCGGCCC AGCCGAGATG GTGGTCGCGA ATCGCGACGT CGACAAGGCG
CGCGCACTGT CCGCGCAGGT CGCCGGACGC GGGCCGCTGG CGGCGTGCGG CTATGCCGAT
CTCGTCGCGA TGGGACGTTT CGATCTGGTG GTGAACGCCA CGTCGGCGAG CCTTGCCGGC
GATCTGCCGC CCGTCCCGCC GGGCGTGTTC AGCCCGACCG GAGCCGCGTA CGAGCTTGCT
TACGGCAAGC GGCTGACGCC CTTTCTCCGG CTCGCACGCA ATGCCGGCGT GCGCCGCGTC
GCGGACGGCG TCGGCATGCT GGTCGAGCAG GCTGCCGAAG CGTTCGCGTG GTGGCGCGGC
GTGCGCCCCG AGACCGCCAC CGTGATCGAA CGACTCACGG TCCCGCTCGA CTGA
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| Protein sequence | MTDQYAVIGN PIGHTKSPLI HGIFAQASRQ DLHYSAIEGP LEPEGAFVDV VRAFAARGGK
GINITAPFKL QAFAMSDERS ERAALAGAAN ALKFEGGRIL ADNFDGIGLV RDIEINLGLP
MAGKRVLMLG AGGAARGALL PFLAAGPAEM VVANRDVDKA RALSAQVAGR GPLAACGYAD
LVAMGRFDLV VNATSASLAG DLPPVPPGVF SPTGAAYELA YGKRLTPFLR LARNAGVRRV
ADGVGMLVEQ AAEAFAWWRG VRPETATVIE RLTVPLD
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