| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6211 |
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| Symbol | |
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| ID | 6182002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 798255 |
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| End bp | 800162 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689339 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001816198 |
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| Protein GI | 172065486 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.156837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CATTCGATTA CTCCGGGCTG CTGATCCCGA TCGCGTTCGC CGTGCTGGTC
GCGGTTCAAC TGCTCGCGTA TCACCCGGCC GCGACGTCGA TTTCCTACAG CGATTTTCAC
CACCTGATCG ACGCACGCCT CGTCGATGAT CTGGAAATCG GCCCGTCGTC GATCTCGGGC
AAGCTGCGCA TGCCCGAAGC GGGCGCCGCG CTGCCCGCTT CCGACGCGGC GGAGTTGAAG
GGGGCCGGAC CGCCGTGGCG CTTCACCACG AACCGGGTGA GCGACGAAGG TCTGGTCGCC
GCGCTGACGG CTGCCGGGAT TCGCTACCGC GGCGCGACGG ATACGGGCTG GATCGGGACG
CTCGCGGCAT GGAGTTTCCC GTTGATCGGC TTCGTCGTGA TCTGGAGTTT CATGCTGCGA
AGGCCGGGCG GAATGCGGGA TATGAGCGGC ATGGGAAAGA GCCGGGCCCG CGTGTACATG
CAGAAGGAAA CCGGCATCAC GTTCGACGAT ATCGCGGGCA TCGACGAGGC GAAGGCCGAA
TTGCAGCAGA TCGTCGCGTT TCTGCGCAAC CCCGAACGCT ATCAACGGCT CGGCGGCAAG
ATCCCGAAGG GCGTACTGAT CGTCGGAGCG CCCGGTACCG GCAAGACGCT GCTGGCCCGT
GCGGTCGCCG GCGAGGCCGC GGTGCCGTTC TTCACGATCA GCGGCTCGGC GTTCGTCGAG
ATGTTCGTCG GCGTCGGTGC TGCGCGCGTG CGCGATCTCT TCGAGCAGGC CCAGCAGAGC
GCGCCGTGCA TCGTGTTTAT CGACGAGCTC GATGCGCTCG GCAAGGCGCG CAGTGTCGGC
CTGATGTCGG GCAATGACGA GCGCGAGCAG ACGCTGAACC AGCTGCTCGT CGAGATGGAC
GGCTTTCAGG CCAATTCGGG CGTCATCATC GTGGCCGCGA CCAACCGGCC GGAAATCCTG
GATCCCGCGC TGCTGCGCCC GGGACGGTTC GACCGGCACA TCGCGATCGA CCGGCCGGAC
CTGACCGGGC GCAAGCAGAT CCTCGCCGTG CATACGAAGC GCGTGAAGCT TGCCCCGGAA
GTCGACCTTG CCGAACTGGC GCAGCGCACG CCGGGCTTCG TCGGCGCCGA TCTCGCGAAC
GTCGTCAACG AAGCCGCGTT GCATGCCGCC GAACTCGGCA AGCCGGCCAT CGGAATGGCC
GATTTCGACG AAGCCATCGA TCGTGCGATG ACCGGCATGG AGCGCAAGAG CCGCGTGATG
AACGAACAGG AGAAGCGGAC CATCGCGTAC CACGAATCGG GGCATGCGCT CGTCGCGCAA
AGCCGCGCGC ACTGCGATCC CGTGAAGAAA GTATCGATCA TCCCGCGCGG AATCGCCGCG
CTCGGCTATA CGCAGCAGGT GCCGACCGAG GATCGCTACG TGCTGCGCCG CAGCGAACTG
CTCGACCGGC TCGACGTGTT GCTCGGCGGC CGGGTGGCCG AGGAAATCGC GTTCGGCGAC
GTGTCGACCG GCGCGCAGAA CGATCTCGAA CGCGCGACCG CGCTGGCACG GCACATGGTC
ATGCAGTACG GGATGAGCGA GAAGATCGGC CTCGCGACGC TCGACGATGG CGCACGCCAG
GGCGGCGCGC CGGGCGTCTG GACGCCGGGT GACGGACGCT GCAGCGAGCA CACGGCGCGA
CTGATCGACG AAGAGGTGCG CGCACTGCTC GAGGATGCGC ATGCGCGGGT CATGGCGACG
CTCCGCAAGC ATCGCGATGC GCTCGAACGG ATCGCGCGCA GCTTGCTGCA GCACGAATCG
ATCGATCACG GCATGCTCGT GGCGCTCATC ACGCCGCCGG ACGATGCCGG CGAGGCGCCC
CGGCCGGCGC CCGCCGACAC GGAAACGACC ACGGTCGCCT CCGCCTGA
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| Protein sequence | MKKTFDYSGL LIPIAFAVLV AVQLLAYHPA ATSISYSDFH HLIDARLVDD LEIGPSSISG
KLRMPEAGAA LPASDAAELK GAGPPWRFTT NRVSDEGLVA ALTAAGIRYR GATDTGWIGT
LAAWSFPLIG FVVIWSFMLR RPGGMRDMSG MGKSRARVYM QKETGITFDD IAGIDEAKAE
LQQIVAFLRN PERYQRLGGK IPKGVLIVGA PGTGKTLLAR AVAGEAAVPF FTISGSAFVE
MFVGVGAARV RDLFEQAQQS APCIVFIDEL DALGKARSVG LMSGNDEREQ TLNQLLVEMD
GFQANSGVII VAATNRPEIL DPALLRPGRF DRHIAIDRPD LTGRKQILAV HTKRVKLAPE
VDLAELAQRT PGFVGADLAN VVNEAALHAA ELGKPAIGMA DFDEAIDRAM TGMERKSRVM
NEQEKRTIAY HESGHALVAQ SRAHCDPVKK VSIIPRGIAA LGYTQQVPTE DRYVLRRSEL
LDRLDVLLGG RVAEEIAFGD VSTGAQNDLE RATALARHMV MQYGMSEKIG LATLDDGARQ
GGAPGVWTPG DGRCSEHTAR LIDEEVRALL EDAHARVMAT LRKHRDALER IARSLLQHES
IDHGMLVALI TPPDDAGEAP RPAPADTETT TVASA
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