| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6207 |
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| Symbol | |
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| ID | 6181998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 794214 |
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| End bp | 795287 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689335 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001816194 |
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| Protein GI | 172065482 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.19774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TCCCGCGCCC TCTTCTGATC GGCATCGGCG CGGCCGTGCT CGCGATCGGC
GTCGCGTATT ACGGATGGGC GCGCTGGCGC GACGGCCAGA CGGATGCGGG GCTCGTCAGC
GGCAACGGCC GCATCGAGGC GACCGAAATC GACGTCGCGA CCAAGCTGCC GGGGCGCGTC
ACCGCCATGC TCGTCGATGA GGGTGACTTC GTGACGGCCG GCCAGCCGCT GGCGCGCATG
GACGTCGTCG TGCTGCAGGC GCAGCTCGAC GAAGCGCAGG CCCGGGAGCA ACAGGCGGTG
AACAACGCGG CGAGCATCGA AGCGCAGGTC GCGCAGCGCC GCAGCGACAA GACAGCGGCG
GCGGCTGTCG TCGTCCAGCG CGAAAGCGAG CTCGACGCGG CCACGCGGCG GCTCGCGCGG
TCCGAAACGC TGTCGCGCGA TGGCGCGTCG TCGATGCAGG AACTGGACGA CGATCGCGCA
CGTGCCGGCA GCCTGCGCGC GACGGTGAAT GCCGCGCGCG CGCAGGTGGA AGCCGCCCAG
GCCGCCGTCG ATGCAACGCG GGCCCAGCTG GTCGCGGCGC GCTCGGCCGT GACGGCCGCG
CAGGCGACCG TGGCGCGCGT GCGGGCCGAC ATCTCGGATA GCGAATTGAC GTCGCCGCGC
GACGGGCGCG TCCAGTACCG GATTGCCGAG TCGGGCGAAG TGCTGCCGGC GGGCGGCAAG
GTGCTCAATG TCGTCGACCT GTCCGACGTC TACATGACGT TCTTTTTGCC CGAAGCGGTC
GTCGGCCGGG TTCCGCTCGG CGCCGACGTG CGGATCGTGC TCGATGCCGC GCCGGAATAC
GTGATTCCGG CACGCGTGTC TTATGTGTCG AGCACTGCGC AGTTCACGCC GAAGACGGTC
GAGACGGCCA CCGAGCGGCA GAAACTGATG TTTCGGGTCA AGGCCCGCAT CGACCGCGAT
CTGTTGCAGC GCCACCTGAA ACTCGTCAAG ACCGGGTTGC CTGGCGTCGC GTGGCTGAAG
ACCGACCCGC ATGCCGGCTG GCCGGATCGC CTCGAGATCA AGGTGCCGAA ATGA
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| Protein sequence | MKTIPRPLLI GIGAAVLAIG VAYYGWARWR DGQTDAGLVS GNGRIEATEI DVATKLPGRV
TAMLVDEGDF VTAGQPLARM DVVVLQAQLD EAQAREQQAV NNAASIEAQV AQRRSDKTAA
AAVVVQRESE LDAATRRLAR SETLSRDGAS SMQELDDDRA RAGSLRATVN AARAQVEAAQ
AAVDATRAQL VAARSAVTAA QATVARVRAD ISDSELTSPR DGRVQYRIAE SGEVLPAGGK
VLNVVDLSDV YMTFFLPEAV VGRVPLGADV RIVLDAAPEY VIPARVSYVS STAQFTPKTV
ETATERQKLM FRVKARIDRD LLQRHLKLVK TGLPGVAWLK TDPHAGWPDR LEIKVPK
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