Gene BamMC406_6206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6206 
Symbol 
ID6181997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp791407 
End bp794217 
Gene Length2811 bp 
Protein Length936 aa 
Translation table11 
GC content69% 
IMG OID641689334 
ProductABC transporter related 
Protein accessionYP_001816193 
Protein GI172065481 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.84654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.203674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA CGGCACCTGG CCGCCCGGAT GCCGGCCGTA TCGACGGTCC GCCGGCGTCG 
CCTGGCCCGT GCCTGGTCGC GCGGCTGGCA GGCGTCTCGC TGCGCTATGG CGGCACGTAC
GCACTCGACG ACGTGACACT CGACATCCCG GCCGGCCGCA TGATCGGGCT GATCGGGCCG
GACGGCGTCG GCAAGTCGAG CCTGCTCGCG CTGGTGTCCG GCGCGCGGGC GATCCAGCAG
GGCCGGGTGT GGACGCTCGA CTGCGACCTG TCGTTGCGTC GCCATCGCGC GCGCGTCTGC
CGGCGCATCG CGTACATGCC GCAAGGCCTT GGCCGGAACC TGTACGCGAC GTTGTCGGTC
GAGGAAAACC TGCAGTTTTT CGCGAGACTG TTCGGCCACG ATGCGGCGGA GCGGCGCCGC
CGGATCGATA CGCTTACGCG CAGCACGGGC CTGTATCCGT TCCTGAATCG ACCTGCCGGC
AAGCTGTCCG GCGGCATGAA GCAGAAGCTC GGCCTGTGCT GCGCGCTGAT CCACGATCCT
GACCTGCTGA TCCTGGACGA GCCGACGACC GGCGTCGATC CGTTGTCGCG CGCGCAGTTC
TGGGAACTGA TCGGGCGCAT TCGCGCCGCG CGCCCGGCGA TGAGCGTGCT GGTCGCCACC
GCGTACATGG ACGAAGCCCG GCGTTTCGAC CGGCTGATCG CGATGGACGC GGGCCGCGTG
CTTGCAACGG GCAGCCCCGG CGAACTGCTG GAACGCACCG GGTGCGACAC GCTGGAGGCC
GCGTTCATCG CGCTGCTCCC GGAGGAGCGC CGGCGCGGAC ACCAGCCGGT CCGCATCGCG
CCGTTCCAGC TCGACGAGGC TGCCGGTTAC GCGATCGAGG CCGACGCGCT GACGATGCGG
TTCGGCGATT TCGTCGCGGT CGATCACGTG AGCCTGCAGA TCCGCCGCGG TGAAATCTTC
GGCTTTCTCG GCTCCAACGG CTGCGGCAAG TCGACGACCA TGAAGATGCT CACGGGCCTG
CTGCCCGCGT CGGAAGGCAC CGCGACGCTG TTCGGCAGGC AGGTCGCCGC CGACGACATC
GACACGCGCC GTCGTGTCGG CTACATGTCG CAAGGGTTTT CGCTCTACGG GGAGCTGACC
GTCCGGCAGA ACCTCGTGCT GCACGCGCGC CTGTTCGGCG TACCGGAACC GGACGTGCCC
GCGCGGGTGA CCGAAATGGT CGCGCGCTTC GGGCTCGCCG ACGCGCTCGA TGCGCTGCCG
GAGCGCCTGC CGCTCGGCAT GCGGCAGCGG TTGTCCCTCG CGGTGGCGAT GGTGCACAAG
CCCGAGTTGC TGATCCTGGA CGAGCCGACG TCAGGCGTCG ACCCGGTCGC GCGGGACGAC
TTCTGGCGGC TGATGATCGA GCTCGCGCGC AATGATCGCG TCACCATCTT CATTTCGACG
CACTTCATGA ACGAAGCGGC GCGTTGCGAC CGCATCTCGC TGATGCATGC GGGCCGCGTA
CTCGCGAGCG CCGCCCCGGC GGAACTGGTA CGCCGGCGCG GCGCGGCTAC GCTCGAGGAC
GCGTTCATCG GCTACCTGAG CGACGCACAA CGCGCGGATG GCAACGGCGA CGCGGCGGCC
GACGCCGGCT GGCTCGCCGC GCCGCCCTCG CCGCCCGCAT CGGCCGGAGC GGGCCATGCG
GCCGCATGGT TCAGCCCGGC GCGCGCCGGC AGTTACCTGT GGCGCGAAGT GCTGGAACTG
CGGCGCGACC CATTGCGCGC GACGCTGGCG CTGTTCGGTT CGCTCGTGCT GATGTGCGTG
ATCAGTATCG GGATCAGTCT CGACGTCGAC AACCTGACGT TCGCGGTACT CGACCGCGAT
CAGTCGATCC TGAGCCAGGA CTATGCGCAG AATCTCGCCG GTTCCCGCTA CTTCGTGCCG
CGCGCGCCGC TCGCGGACGA CCGCGATATC GAACGCCGCC TGCGCAACGG CCAATTGTCG
CTCGCGCTCG AGATTCCGCC CGGCTTTGCG CGCGACGTCG CGCGCGGCCG GCGCGTGGAA
ATCGGCGCAT GGGTCGACGG CGCGATGCCG ATGCGCGCGG AGACGATCCG CGGCTACGTG
GCCGGCATGC ATGAAAACTG GCTGCGCGAC CAGGCGAAGC GCCGGCTCGG CGTGTCGCTC
GTCCCGACGG TCGACATCGC GATCCGCTAT CGCTACAACC CCGACGTCAA GAGCCTGCCG
GCGATGATTC CGGCGATCAT GCCGATGCTG CTGCTGATGC TGCCCGCGAT GCTGACGGCG
CTCGCCGTCG TGCGGGAACG CGAGCTCGGG TCGATCGTCA ACCTGTACGT GACACCTGTC
ACGCGCGCCG AATTCCTGCT CGGCAAGCAG GCGCCGTACG TGATGCTGGC CATGCTGAAC
TTCCTGCTGA TGGTCGTGCT GGCCGACGTC GTGTTCGGCG TGCGGATCAA GGGAAGTTTC
GCGACGCTGG CGGCCGCGGT GCTGATATTC AATGTCGTGG CCACCGGCAT CGGCCTGTTC
GCGTCGACGT TCACCCGCAG CCAGATCGCC GCGATCTTCA TGACGATCGT CGGCACGCTG
ATTCCCGTCG TGCAGTTCTC CGGCCTGCTC ACGCCGTTGT CGTCGCTCGA AGGCAGCGGC
AAGTGGGTCG GCACGGTCTA TCCGGCCACC TACATGCTCG CGATCAGCCG CGGCGTCTAC
AACAAGGCGC TCGGCCTGGG CGACCTGTCG TCCCAGTTCT GGCCGATGCT CGCGGCCGTG
CCGGTCATCC TGGTGATGAC CGGCGTGCTG CTGCGCAAGC AGGAGCGCTG A
 
Protein sequence
MKATAPGRPD AGRIDGPPAS PGPCLVARLA GVSLRYGGTY ALDDVTLDIP AGRMIGLIGP 
DGVGKSSLLA LVSGARAIQQ GRVWTLDCDL SLRRHRARVC RRIAYMPQGL GRNLYATLSV
EENLQFFARL FGHDAAERRR RIDTLTRSTG LYPFLNRPAG KLSGGMKQKL GLCCALIHDP
DLLILDEPTT GVDPLSRAQF WELIGRIRAA RPAMSVLVAT AYMDEARRFD RLIAMDAGRV
LATGSPGELL ERTGCDTLEA AFIALLPEER RRGHQPVRIA PFQLDEAAGY AIEADALTMR
FGDFVAVDHV SLQIRRGEIF GFLGSNGCGK STTMKMLTGL LPASEGTATL FGRQVAADDI
DTRRRVGYMS QGFSLYGELT VRQNLVLHAR LFGVPEPDVP ARVTEMVARF GLADALDALP
ERLPLGMRQR LSLAVAMVHK PELLILDEPT SGVDPVARDD FWRLMIELAR NDRVTIFIST
HFMNEAARCD RISLMHAGRV LASAAPAELV RRRGAATLED AFIGYLSDAQ RADGNGDAAA
DAGWLAAPPS PPASAGAGHA AAWFSPARAG SYLWREVLEL RRDPLRATLA LFGSLVLMCV
ISIGISLDVD NLTFAVLDRD QSILSQDYAQ NLAGSRYFVP RAPLADDRDI ERRLRNGQLS
LALEIPPGFA RDVARGRRVE IGAWVDGAMP MRAETIRGYV AGMHENWLRD QAKRRLGVSL
VPTVDIAIRY RYNPDVKSLP AMIPAIMPML LLMLPAMLTA LAVVRERELG SIVNLYVTPV
TRAEFLLGKQ APYVMLAMLN FLLMVVLADV VFGVRIKGSF ATLAAAVLIF NVVATGIGLF
ASTFTRSQIA AIFMTIVGTL IPVVQFSGLL TPLSSLEGSG KWVGTVYPAT YMLAISRGVY
NKALGLGDLS SQFWPMLAAV PVILVMTGVL LRKQER