Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6206 |
Symbol | |
ID | 6181997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 791407 |
End bp | 794217 |
Gene Length | 2811 bp |
Protein Length | 936 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641689334 |
Product | ABC transporter related |
Protein accession | YP_001816193 |
Protein GI | 172065481 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.84654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.203674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCGA CGGCACCTGG CCGCCCGGAT GCCGGCCGTA TCGACGGTCC GCCGGCGTCG CCTGGCCCGT GCCTGGTCGC GCGGCTGGCA GGCGTCTCGC TGCGCTATGG CGGCACGTAC GCACTCGACG ACGTGACACT CGACATCCCG GCCGGCCGCA TGATCGGGCT GATCGGGCCG GACGGCGTCG GCAAGTCGAG CCTGCTCGCG CTGGTGTCCG GCGCGCGGGC GATCCAGCAG GGCCGGGTGT GGACGCTCGA CTGCGACCTG TCGTTGCGTC GCCATCGCGC GCGCGTCTGC CGGCGCATCG CGTACATGCC GCAAGGCCTT GGCCGGAACC TGTACGCGAC GTTGTCGGTC GAGGAAAACC TGCAGTTTTT CGCGAGACTG TTCGGCCACG ATGCGGCGGA GCGGCGCCGC CGGATCGATA CGCTTACGCG CAGCACGGGC CTGTATCCGT TCCTGAATCG ACCTGCCGGC AAGCTGTCCG GCGGCATGAA GCAGAAGCTC GGCCTGTGCT GCGCGCTGAT CCACGATCCT GACCTGCTGA TCCTGGACGA GCCGACGACC GGCGTCGATC CGTTGTCGCG CGCGCAGTTC TGGGAACTGA TCGGGCGCAT TCGCGCCGCG CGCCCGGCGA TGAGCGTGCT GGTCGCCACC GCGTACATGG ACGAAGCCCG GCGTTTCGAC CGGCTGATCG CGATGGACGC GGGCCGCGTG CTTGCAACGG GCAGCCCCGG CGAACTGCTG GAACGCACCG GGTGCGACAC GCTGGAGGCC GCGTTCATCG CGCTGCTCCC GGAGGAGCGC CGGCGCGGAC ACCAGCCGGT CCGCATCGCG CCGTTCCAGC TCGACGAGGC TGCCGGTTAC GCGATCGAGG CCGACGCGCT GACGATGCGG TTCGGCGATT TCGTCGCGGT CGATCACGTG AGCCTGCAGA TCCGCCGCGG TGAAATCTTC GGCTTTCTCG GCTCCAACGG CTGCGGCAAG TCGACGACCA TGAAGATGCT CACGGGCCTG CTGCCCGCGT CGGAAGGCAC CGCGACGCTG TTCGGCAGGC AGGTCGCCGC CGACGACATC GACACGCGCC GTCGTGTCGG CTACATGTCG CAAGGGTTTT CGCTCTACGG GGAGCTGACC GTCCGGCAGA ACCTCGTGCT GCACGCGCGC CTGTTCGGCG TACCGGAACC GGACGTGCCC GCGCGGGTGA CCGAAATGGT CGCGCGCTTC GGGCTCGCCG ACGCGCTCGA TGCGCTGCCG GAGCGCCTGC CGCTCGGCAT GCGGCAGCGG TTGTCCCTCG CGGTGGCGAT GGTGCACAAG CCCGAGTTGC TGATCCTGGA CGAGCCGACG TCAGGCGTCG ACCCGGTCGC GCGGGACGAC TTCTGGCGGC TGATGATCGA GCTCGCGCGC AATGATCGCG TCACCATCTT CATTTCGACG CACTTCATGA ACGAAGCGGC GCGTTGCGAC CGCATCTCGC TGATGCATGC GGGCCGCGTA CTCGCGAGCG CCGCCCCGGC GGAACTGGTA CGCCGGCGCG GCGCGGCTAC GCTCGAGGAC GCGTTCATCG GCTACCTGAG CGACGCACAA CGCGCGGATG GCAACGGCGA CGCGGCGGCC GACGCCGGCT GGCTCGCCGC GCCGCCCTCG CCGCCCGCAT CGGCCGGAGC GGGCCATGCG GCCGCATGGT TCAGCCCGGC GCGCGCCGGC AGTTACCTGT GGCGCGAAGT GCTGGAACTG CGGCGCGACC CATTGCGCGC GACGCTGGCG CTGTTCGGTT CGCTCGTGCT GATGTGCGTG ATCAGTATCG GGATCAGTCT CGACGTCGAC AACCTGACGT TCGCGGTACT CGACCGCGAT CAGTCGATCC TGAGCCAGGA CTATGCGCAG AATCTCGCCG GTTCCCGCTA CTTCGTGCCG CGCGCGCCGC TCGCGGACGA CCGCGATATC GAACGCCGCC TGCGCAACGG CCAATTGTCG CTCGCGCTCG AGATTCCGCC CGGCTTTGCG CGCGACGTCG CGCGCGGCCG GCGCGTGGAA ATCGGCGCAT GGGTCGACGG CGCGATGCCG ATGCGCGCGG AGACGATCCG CGGCTACGTG GCCGGCATGC ATGAAAACTG GCTGCGCGAC CAGGCGAAGC GCCGGCTCGG CGTGTCGCTC GTCCCGACGG TCGACATCGC GATCCGCTAT CGCTACAACC CCGACGTCAA GAGCCTGCCG GCGATGATTC CGGCGATCAT GCCGATGCTG CTGCTGATGC TGCCCGCGAT GCTGACGGCG CTCGCCGTCG TGCGGGAACG CGAGCTCGGG TCGATCGTCA ACCTGTACGT GACACCTGTC ACGCGCGCCG AATTCCTGCT CGGCAAGCAG GCGCCGTACG TGATGCTGGC CATGCTGAAC TTCCTGCTGA TGGTCGTGCT GGCCGACGTC GTGTTCGGCG TGCGGATCAA GGGAAGTTTC GCGACGCTGG CGGCCGCGGT GCTGATATTC AATGTCGTGG CCACCGGCAT CGGCCTGTTC GCGTCGACGT TCACCCGCAG CCAGATCGCC GCGATCTTCA TGACGATCGT CGGCACGCTG ATTCCCGTCG TGCAGTTCTC CGGCCTGCTC ACGCCGTTGT CGTCGCTCGA AGGCAGCGGC AAGTGGGTCG GCACGGTCTA TCCGGCCACC TACATGCTCG CGATCAGCCG CGGCGTCTAC AACAAGGCGC TCGGCCTGGG CGACCTGTCG TCCCAGTTCT GGCCGATGCT CGCGGCCGTG CCGGTCATCC TGGTGATGAC CGGCGTGCTG CTGCGCAAGC AGGAGCGCTG A
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Protein sequence | MKATAPGRPD AGRIDGPPAS PGPCLVARLA GVSLRYGGTY ALDDVTLDIP AGRMIGLIGP DGVGKSSLLA LVSGARAIQQ GRVWTLDCDL SLRRHRARVC RRIAYMPQGL GRNLYATLSV EENLQFFARL FGHDAAERRR RIDTLTRSTG LYPFLNRPAG KLSGGMKQKL GLCCALIHDP DLLILDEPTT GVDPLSRAQF WELIGRIRAA RPAMSVLVAT AYMDEARRFD RLIAMDAGRV LATGSPGELL ERTGCDTLEA AFIALLPEER RRGHQPVRIA PFQLDEAAGY AIEADALTMR FGDFVAVDHV SLQIRRGEIF GFLGSNGCGK STTMKMLTGL LPASEGTATL FGRQVAADDI DTRRRVGYMS QGFSLYGELT VRQNLVLHAR LFGVPEPDVP ARVTEMVARF GLADALDALP ERLPLGMRQR LSLAVAMVHK PELLILDEPT SGVDPVARDD FWRLMIELAR NDRVTIFIST HFMNEAARCD RISLMHAGRV LASAAPAELV RRRGAATLED AFIGYLSDAQ RADGNGDAAA DAGWLAAPPS PPASAGAGHA AAWFSPARAG SYLWREVLEL RRDPLRATLA LFGSLVLMCV ISIGISLDVD NLTFAVLDRD QSILSQDYAQ NLAGSRYFVP RAPLADDRDI ERRLRNGQLS LALEIPPGFA RDVARGRRVE IGAWVDGAMP MRAETIRGYV AGMHENWLRD QAKRRLGVSL VPTVDIAIRY RYNPDVKSLP AMIPAIMPML LLMLPAMLTA LAVVRERELG SIVNLYVTPV TRAEFLLGKQ APYVMLAMLN FLLMVVLADV VFGVRIKGSF ATLAAAVLIF NVVATGIGLF ASTFTRSQIA AIFMTIVGTL IPVVQFSGLL TPLSSLEGSG KWVGTVYPAT YMLAISRGVY NKALGLGDLS SQFWPMLAAV PVILVMTGVL LRKQER
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