Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6198 |
Symbol | |
ID | 6182439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 785959 |
End bp | 786429 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641689326 |
Product | UspA domain-containing protein |
Protein accession | YP_001816185 |
Protein GI | 172065473 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.227044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.53809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAAC GGATCTTCGC GGCACTCGAC GGCAGCCGCA GCGCGCGGCT CGCGCTCGAC GAGGCGATTT CACTCGCCCG CGATTCGGGT AGCCTGGTCA TCGCCATGTG CGTGGTATCG GATGCGCTCC GGCTGGCCGA CGTCGACAGT GGCTATATCG ATCAGCGCGA TCCGGCCGGA CTGGACGCGG ACAAGGCCGC GATCGCGGTC TCGGACGCGG AAGCCGCGTT TCGGCTGTCC GGCGTACGCG GCATCGCGCG CACGATCGAT GCGGGCGGAG CGGACATTTC GGACGTGCTG GCGCGCGCCG CCGCCGAATG CGATGCGGAC CTGATCGTGA TGGGCACGCA TGGTCGTCGC GGGCTGCGCC GGGCGTTGCT CGGCAGCGTC GCCGAATCGC TGGTGCGCAT CGCGGACCGG CCGGTGCTGG TCGTACGGGA GGGGCCGGGC GGGTGCGCCG GCGTGTTGTG A
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Protein sequence | MYQRIFAALD GSRSARLALD EAISLARDSG SLVIAMCVVS DALRLADVDS GYIDQRDPAG LDADKAAIAV SDAEAAFRLS GVRGIARTID AGGADISDVL ARAAAECDAD LIVMGTHGRR GLRRALLGSV AESLVRIADR PVLVVREGPG GCAGVL
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