Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6197 |
Symbol | |
ID | 6182438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 783714 |
End bp | 785711 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641689325 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001816184 |
Protein GI | 172065472 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.163996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.752378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTGA ATGCGCGCTC CTTCGAGGGC GGGCCGACTC CGCACCGGAC CCGGCCCGCC CGATACGCAG CCATGGCCGC GCTGCTGACG CTCGCGCTGG GTCTGGCTGC ATCGTTCTCG GCATGCCGGT TACTGCAGGA GGAGGCCCAA CAAGACGCCC AGGCAAGGTT CGAGCAAACC GCGACATTCG CGACGGCCGA CCTCCGGCGC AGCCTCCTTG GCGCCGCTGC CGTATTGCGC GGCGCGCGCG GCTTCGCGTC GACGCTGACA CAGCCGCAAT CCGGGCCTGC GTGGCGCGGC TATCTCGCCA GTCTCAATCT GGACGGATTG CAATCCACCG TCCGCAGCTT AGGAAGAATC GAACCGAGTG CCGCCGTCGA CGATCTGCCG ACCCGGCAGG CGCTGCAGCG GGCGGTGGAA ACCGGCAAGG TCGCGATGGC CGCGAACGCG CTACAGGACA GCACCGATGC GTCGAGCGCC CGGACAGAAC TGACGCTGTA CTTGCCGATT TATGCGGATA CTGAACATGG GGCTCTGTCC AGGCTACGAC ACGCGAGCGC AACCGGGTAC GTTTATGCGT CGCTGAACCC GGATCGTCTC ATCGATTCGT CCGTACTCGC GCGACTGCGC ATCGAAATCA TGGCCGACAA TCCGGCGGCA CCTGTCTATT CGGGCGGCTT CGGCGGCGGC GACACCTCCT CGAGCGTACG CGATACGTTC GGGCGAATCG ATTCGTTGAC GTTTGGCGGC ACGCCGCTGT CGCTGCACTA CACGGCGTCG CGCCCCGCCA TGTCCGGCGC GGCGATCGGC GTGCTGCTGG CCGGCCTCGC GCTGTCGCTG ACGCTGGCCG CGCTGGTGCA GAAAGTCATC GCGAAGCGCG CGCTCGCCGG TATGCACCCC GGGGACGGCC CACCTACCGA GGCCCGGATG ATGGCCATCA TCCGGTCATC GATGGAGGCC ATCATTACCG TCGACGAAAA CCAGACGATC GTGATCTTCA ACCCGGCAGC CGAACGCGTG TTCTGTGTCT CCGCGATGGA CGCGATTGGT GCGCCGCTTT CCCGTTTCAT CCCTGAGCGC TTCCGCGCCG CACATGCGCG ACATGTCGAG CAATTCGGCG TGACCGGCGT GTCGGAGCGA CAGATGGGGC GGCAACGCGT GCTGTTCGGC TTGCGCGGCG ACGGCACCGA GTTTCCGATC GAGGCATCGA TCTCGCAGAT TCGCGACGGC ACGAGCAAGC TGTACACGGT CATGTTGCGC GACGTCACCG AGCGGGTGCG AGCGGAAACC GCCCTCAAGC AGTCGCGCGA GGAACTGCGC GACCTGTCGG CCAACCTGCA GAACGTGCGA GAGGAGGAGA AGACGCGGAT TGCGCGCGAA CTGCACGATG ACCTCGGTCA GCAACTCACC GCGCTCAAGA TGGATCTCTC CGCCGTCGAA CTGGGGCTCG CGGGCGTTGT CGCCCCCAAC ACCGGCGTGC GCGAACAGTT GGGCGGCATG CATGGCCTGA TCGATTCGAC CGTTGCGTCG GTTCGGCGCA TTGCCGCCGA TCTGCGGCCG GTCATGCTCG ACGATCTGGG CCTCGTCCCT GCGATCGAAT GGCTGGCGAA CGATTTCACG CGCCGCTACA GGATCACGGT CGACCGGGAC ATCGCTCCCG TCGATACCGC GTTCACCGGT GTCGGAGCCA CGACGCTGTT CCGTATCGTG CAGGAGGCGC TGACCAACGT CGCACGGCAC TCTGACGCGA CGAACGTACA GCTCGCATTG AAACTGGAAG AGGGTTATTG CGTGCTGCGC ATCGCGGACA ACGGTCACGG CGCACCGGAG AACGCCCGCA ACGAACAGGA TCGTCCATCG TTCGGCCTGA TCGGCATCCG CGAGCGCGCG CACATGTTCG AGGGCACGGT GACGGTCGAC AACCGGCCAG GAGCAGGATT CACGATCACC GTGGCACTGC CGCTTCACGC CATCCAGCAA GGAGACGCGC TGTCATGA
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Protein sequence | MTVNARSFEG GPTPHRTRPA RYAAMAALLT LALGLAASFS ACRLLQEEAQ QDAQARFEQT ATFATADLRR SLLGAAAVLR GARGFASTLT QPQSGPAWRG YLASLNLDGL QSTVRSLGRI EPSAAVDDLP TRQALQRAVE TGKVAMAANA LQDSTDASSA RTELTLYLPI YADTEHGALS RLRHASATGY VYASLNPDRL IDSSVLARLR IEIMADNPAA PVYSGGFGGG DTSSSVRDTF GRIDSLTFGG TPLSLHYTAS RPAMSGAAIG VLLAGLALSL TLAALVQKVI AKRALAGMHP GDGPPTEARM MAIIRSSMEA IITVDENQTI VIFNPAAERV FCVSAMDAIG APLSRFIPER FRAAHARHVE QFGVTGVSER QMGRQRVLFG LRGDGTEFPI EASISQIRDG TSKLYTVMLR DVTERVRAET ALKQSREELR DLSANLQNVR EEEKTRIARE LHDDLGQQLT ALKMDLSAVE LGLAGVVAPN TGVREQLGGM HGLIDSTVAS VRRIAADLRP VMLDDLGLVP AIEWLANDFT RRYRITVDRD IAPVDTAFTG VGATTLFRIV QEALTNVARH SDATNVQLAL KLEEGYCVLR IADNGHGAPE NARNEQDRPS FGLIGIRERA HMFEGTVTVD NRPGAGFTIT VALPLHAIQQ GDALS
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