| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6197 |
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| Symbol | |
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| ID | 6182438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 783714 |
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| End bp | 785711 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689325 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001816184 |
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| Protein GI | 172065472 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.163996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.752378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTGA ATGCGCGCTC CTTCGAGGGC GGGCCGACTC CGCACCGGAC CCGGCCCGCC
CGATACGCAG CCATGGCCGC GCTGCTGACG CTCGCGCTGG GTCTGGCTGC ATCGTTCTCG
GCATGCCGGT TACTGCAGGA GGAGGCCCAA CAAGACGCCC AGGCAAGGTT CGAGCAAACC
GCGACATTCG CGACGGCCGA CCTCCGGCGC AGCCTCCTTG GCGCCGCTGC CGTATTGCGC
GGCGCGCGCG GCTTCGCGTC GACGCTGACA CAGCCGCAAT CCGGGCCTGC GTGGCGCGGC
TATCTCGCCA GTCTCAATCT GGACGGATTG CAATCCACCG TCCGCAGCTT AGGAAGAATC
GAACCGAGTG CCGCCGTCGA CGATCTGCCG ACCCGGCAGG CGCTGCAGCG GGCGGTGGAA
ACCGGCAAGG TCGCGATGGC CGCGAACGCG CTACAGGACA GCACCGATGC GTCGAGCGCC
CGGACAGAAC TGACGCTGTA CTTGCCGATT TATGCGGATA CTGAACATGG GGCTCTGTCC
AGGCTACGAC ACGCGAGCGC AACCGGGTAC GTTTATGCGT CGCTGAACCC GGATCGTCTC
ATCGATTCGT CCGTACTCGC GCGACTGCGC ATCGAAATCA TGGCCGACAA TCCGGCGGCA
CCTGTCTATT CGGGCGGCTT CGGCGGCGGC GACACCTCCT CGAGCGTACG CGATACGTTC
GGGCGAATCG ATTCGTTGAC GTTTGGCGGC ACGCCGCTGT CGCTGCACTA CACGGCGTCG
CGCCCCGCCA TGTCCGGCGC GGCGATCGGC GTGCTGCTGG CCGGCCTCGC GCTGTCGCTG
ACGCTGGCCG CGCTGGTGCA GAAAGTCATC GCGAAGCGCG CGCTCGCCGG TATGCACCCC
GGGGACGGCC CACCTACCGA GGCCCGGATG ATGGCCATCA TCCGGTCATC GATGGAGGCC
ATCATTACCG TCGACGAAAA CCAGACGATC GTGATCTTCA ACCCGGCAGC CGAACGCGTG
TTCTGTGTCT CCGCGATGGA CGCGATTGGT GCGCCGCTTT CCCGTTTCAT CCCTGAGCGC
TTCCGCGCCG CACATGCGCG ACATGTCGAG CAATTCGGCG TGACCGGCGT GTCGGAGCGA
CAGATGGGGC GGCAACGCGT GCTGTTCGGC TTGCGCGGCG ACGGCACCGA GTTTCCGATC
GAGGCATCGA TCTCGCAGAT TCGCGACGGC ACGAGCAAGC TGTACACGGT CATGTTGCGC
GACGTCACCG AGCGGGTGCG AGCGGAAACC GCCCTCAAGC AGTCGCGCGA GGAACTGCGC
GACCTGTCGG CCAACCTGCA GAACGTGCGA GAGGAGGAGA AGACGCGGAT TGCGCGCGAA
CTGCACGATG ACCTCGGTCA GCAACTCACC GCGCTCAAGA TGGATCTCTC CGCCGTCGAA
CTGGGGCTCG CGGGCGTTGT CGCCCCCAAC ACCGGCGTGC GCGAACAGTT GGGCGGCATG
CATGGCCTGA TCGATTCGAC CGTTGCGTCG GTTCGGCGCA TTGCCGCCGA TCTGCGGCCG
GTCATGCTCG ACGATCTGGG CCTCGTCCCT GCGATCGAAT GGCTGGCGAA CGATTTCACG
CGCCGCTACA GGATCACGGT CGACCGGGAC ATCGCTCCCG TCGATACCGC GTTCACCGGT
GTCGGAGCCA CGACGCTGTT CCGTATCGTG CAGGAGGCGC TGACCAACGT CGCACGGCAC
TCTGACGCGA CGAACGTACA GCTCGCATTG AAACTGGAAG AGGGTTATTG CGTGCTGCGC
ATCGCGGACA ACGGTCACGG CGCACCGGAG AACGCCCGCA ACGAACAGGA TCGTCCATCG
TTCGGCCTGA TCGGCATCCG CGAGCGCGCG CACATGTTCG AGGGCACGGT GACGGTCGAC
AACCGGCCAG GAGCAGGATT CACGATCACC GTGGCACTGC CGCTTCACGC CATCCAGCAA
GGAGACGCGC TGTCATGA
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| Protein sequence | MTVNARSFEG GPTPHRTRPA RYAAMAALLT LALGLAASFS ACRLLQEEAQ QDAQARFEQT
ATFATADLRR SLLGAAAVLR GARGFASTLT QPQSGPAWRG YLASLNLDGL QSTVRSLGRI
EPSAAVDDLP TRQALQRAVE TGKVAMAANA LQDSTDASSA RTELTLYLPI YADTEHGALS
RLRHASATGY VYASLNPDRL IDSSVLARLR IEIMADNPAA PVYSGGFGGG DTSSSVRDTF
GRIDSLTFGG TPLSLHYTAS RPAMSGAAIG VLLAGLALSL TLAALVQKVI AKRALAGMHP
GDGPPTEARM MAIIRSSMEA IITVDENQTI VIFNPAAERV FCVSAMDAIG APLSRFIPER
FRAAHARHVE QFGVTGVSER QMGRQRVLFG LRGDGTEFPI EASISQIRDG TSKLYTVMLR
DVTERVRAET ALKQSREELR DLSANLQNVR EEEKTRIARE LHDDLGQQLT ALKMDLSAVE
LGLAGVVAPN TGVREQLGGM HGLIDSTVAS VRRIAADLRP VMLDDLGLVP AIEWLANDFT
RRYRITVDRD IAPVDTAFTG VGATTLFRIV QEALTNVARH SDATNVQLAL KLEEGYCVLR
IADNGHGAPE NARNEQDRPS FGLIGIRERA HMFEGTVTVD NRPGAGFTIT VALPLHAIQQ
GDALS
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