Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6189 |
Symbol | |
ID | 6182430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 777773 |
End bp | 778423 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641689317 |
Product | transport-associated |
Protein accession | YP_001816176 |
Protein GI | 172065464 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.551844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.435123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCG ACAAGCAGTT GAAGCAGGAC GTTCAGGATG AACTGGAATC CGACCCTTCG ATCGATTCGA CCCGCATCGG TGTCGAGGTG AGCGACAGCA TCGTGACGCT TTCGGGGCAC CCGCCTAGCT ATGCGGAGAA GCTGGCGATC GAGCGTGCGG CGAACCGCGT GGCCGGCGTC AAGGCGCTCG TTGTCGACAT GACCGTGCAT CTGCCGGATG ACGACGTGCG TACCGACGAG GACATCGCGA AAGCGGTGCG CTCGGTGCTG CACTGGACGG TCGGTCTGCA TGACGATGCG GTCAAGGTGC AGGTCGAACG CGGCTGGATC ACGCTGTCCG GCAAGGTCGA CTGGGCGTAT CAGAGCCATC TGGCCGTGCG CTCGATCTCG CAGATGCGCA GCGTGACCGG CGTGACCGAC CACATTGCGG TACAGGGAAC GATCGGTGCC GACGACATCG GCAGCAACAT CAAGCGCGCG ATCATGCGTC ACGCGGAACG CGAAGCGAAG CACATCGCGA TCGACGTGCA CGACGGCACC GTGCGGTTGT CCGGCAAGGT CGGCTCGTTT TCCGAGCGCA AGGCCGTGCG CGGTGCCGCG TGGTCGGCGC GAGGCGTGCG CGCGGTCGTC GACGATCTGG TGGTGGAGTA A
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Protein sequence | MKTDKQLKQD VQDELESDPS IDSTRIGVEV SDSIVTLSGH PPSYAEKLAI ERAANRVAGV KALVVDMTVH LPDDDVRTDE DIAKAVRSVL HWTVGLHDDA VKVQVERGWI TLSGKVDWAY QSHLAVRSIS QMRSVTGVTD HIAVQGTIGA DDIGSNIKRA IMRHAEREAK HIAIDVHDGT VRLSGKVGSF SERKAVRGAA WSARGVRAVV DDLVVE
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