Gene BamMC406_6189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6189 
Symbol 
ID6182430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp777773 
End bp778423 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID641689317 
Producttransport-associated 
Protein accessionYP_001816176 
Protein GI172065464 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.551844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.435123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG ACAAGCAGTT GAAGCAGGAC GTTCAGGATG AACTGGAATC CGACCCTTCG 
ATCGATTCGA CCCGCATCGG TGTCGAGGTG AGCGACAGCA TCGTGACGCT TTCGGGGCAC
CCGCCTAGCT ATGCGGAGAA GCTGGCGATC GAGCGTGCGG CGAACCGCGT GGCCGGCGTC
AAGGCGCTCG TTGTCGACAT GACCGTGCAT CTGCCGGATG ACGACGTGCG TACCGACGAG
GACATCGCGA AAGCGGTGCG CTCGGTGCTG CACTGGACGG TCGGTCTGCA TGACGATGCG
GTCAAGGTGC AGGTCGAACG CGGCTGGATC ACGCTGTCCG GCAAGGTCGA CTGGGCGTAT
CAGAGCCATC TGGCCGTGCG CTCGATCTCG CAGATGCGCA GCGTGACCGG CGTGACCGAC
CACATTGCGG TACAGGGAAC GATCGGTGCC GACGACATCG GCAGCAACAT CAAGCGCGCG
ATCATGCGTC ACGCGGAACG CGAAGCGAAG CACATCGCGA TCGACGTGCA CGACGGCACC
GTGCGGTTGT CCGGCAAGGT CGGCTCGTTT TCCGAGCGCA AGGCCGTGCG CGGTGCCGCG
TGGTCGGCGC GAGGCGTGCG CGCGGTCGTC GACGATCTGG TGGTGGAGTA A
 
Protein sequence
MKTDKQLKQD VQDELESDPS IDSTRIGVEV SDSIVTLSGH PPSYAEKLAI ERAANRVAGV 
KALVVDMTVH LPDDDVRTDE DIAKAVRSVL HWTVGLHDDA VKVQVERGWI TLSGKVDWAY
QSHLAVRSIS QMRSVTGVTD HIAVQGTIGA DDIGSNIKRA IMRHAEREAK HIAIDVHDGT
VRLSGKVGSF SERKAVRGAA WSARGVRAVV DDLVVE