| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6173 |
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| Symbol | |
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| ID | 6182592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 761948 |
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| End bp | 764461 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641689301 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001816160 |
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| Protein GI | 172065448 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCCGA ACAGCTATGA TGTTCCGATT GCGCGCCTCG TTGCGCGTCA GATTCTGTCC
TGCGCGCCGG CCACGCCGGT GCGGGAGGTC GCGCGACGCA TGTTCGCCGA ACGTTGCAGC
TCGATCGTCG TGATGAAGGA TGAACAGGTC GTCGGGATCT GGACCGAACA TGATGCACTG
TCGGCCGGCG ACAATCCGCG CGACCTCGAC CGGCCGGTCA GCGAGGTGAT GAGCCATCCG
GTGCTGACGA TCGAGGCCAA TACGCCTCTG GGTGAAGCCG CGTTGAAGTT CAAACAGTCG
GGGGTACGGC ACTTCGTGGT GGTGCGGGAC GGCACCGCGA TCGGCGTGCT GACGCAGACC
GACATCGTCG TGAACCAGGG GGCGGAATTT TTCCTGCACC TGAAGCCGAT CGAATCGATC
CGCGTTCATC CGCCCGTTGT GGTGCCGGAG CAGGCCACGT TGCACGAAGT CATCGCGCGG
ATGCGTGCGC AACGGCTCGA TGCGATTCTC GTCGGCTATG ACGACGGCGA GCACGGCATC
CTGACCGAAC GGGACATCGT CCGTCTGTTG GCAGACGGCG GTGCCGACGG CGCGGTCGGG
GCCTACGCGA GCAAGCCGCT GCAGATGCTG ACAGCGAAGC AGAGCCTGTA TGCAGCGCAG
CGCTTCATGA CCGAGCACAA TATGCGGCAC GTCGGCATCC AAGACGAGGG AGGCAGGCTG
ACCGGGTTGC TCTGTTTCGC GGACGTGCTG CAGAGCATCG AGCACGAATA CGCGAACGAG
CTGCGCAGCG CGTTGCGCGA GCGCGACGAA GCACTGGGTC TCGCGCGCTT CAACCTGCGC
ATGGCGGACC GGGTGTTCGA ATCGGCGCTC GAAGGCATCA TGGTGACCGA CCGGCACGCG
AAGATCGAGC GTGTCAACCA GGCCTTCACG CGGTTGACCG GGTACACCGA GGACGAAGTG
GTCGGGCGCA ACCCGGGTCT GCTGAGTTCC GGGCGCCAGA CTCCCGATTT CTACAAGCAG
CTGTGGCATT CGCTCACGAC CGATGGCCAC TGGCAAGGCG AAATCTGGAA TCGCCGCAAG
ACCGGCGAGC TGTTTCTCGA ATACCTGACG ATCACCAGCA TTCGCGACAG CGAAGGCGAG
ATCTCTCACT ACGCGGCGAT TTTTTCCGAC ATCACACAGC GGCGCCAGGC GGAGGAGCGG
CTGGGCTATC TCGCCACGCA CGACGTGCTC ACCAATCTCG CGAACCGGAT GCTGTTCGAG
GAGCGGCTCA CGCATGCGAT CGTTCACGCG AAGCGGCTCG GTCGCAAGGT CGCGGTGATG
TACCTCGATC TCGACCGCTT CAAGCTGGTC AACGATACGC TCGGGCACAA CGCCGGCGAC
GAGGTGCTGA AGATGGTCGC GGAGCGCATC GTCGCGAACG TGCGCGCGAA CGACACGGTG
GCGCGCATGG GCGGTGACGA ATTCGCGCTC GTGCTCGAGG AGGTCGACGA TGTCCGCGAC
GTGGGGCGAG TCGCGCGCAA GCTGCTTGAC GAAGTGGGAC GGGCGATCGA TATCGTTGAT
CGCCAGATCT TCGTGACGCC GAGCATCGGC ATCAGCATCT ATCCGGACGA CGGCACCGAG
GCGGAGGACT TGATCCTGCT CGCGGACCAG GCGATGTACG GCGCGAAGAA CCGCGGCAGG
AACGTGTTCC AGTTCTTCGA GAGCAAGATG ACGTCGTCGG CGATCGAGCA GCTCGAGACG
CTCGGCGAGT TGCACCGCGC GCTTGAGCAG AATGAATTCC GCCTGTTCTA CCAGCCGCAA
TACGATCTGG CGAGCGGCCG GATCGTCGGC GTGGAGGCGC TGCTGCGCTG GTTGCATCCG
CGCAGGGGTT TGGTGCCGCC GGGCGACTTC ATCGGGCTGG CGGAGCGATC CGCGCTGATC
GTCCCGATCG GCAGGTGGGT GCTGCACGAA GCCTGCCGCC AGGCGCGCTG CTGGCTCGAC
GAGGGCTTCG CGTTCGGGCG TGTGTCGGTG AACGTATCGG CGCGACAGTG TTTTACCGAC
CATTTCCTCA GCGACCTGAC GACCATTCTC AGCGAAACCG CATTGCCGGC CGAATACCTG
CAGCTCGAGT TGCTCGAAAG CATGGCGATG AACACCCGCG AGGAAATCGG CATCCTGCTG
CGCGAACTGG CGACGCGGGG GATCAGCCTC GCGATCGATG ATTTCGGTAC GGGTTATTCG
TCGCTGGTAT ATCTGAAGGA CCTGCCCGTC GATACGCTGA AGATCGATCA GTCGTTCCTC
ACGGACTGCG GCTCGGGCAG CACGGACGAC GCGATCGTGC GCGCGATCGT TGCAATGGGG
CGCGCGCTGG GCCTCGATGT CGTGATGGAG GGCGTCGAGA CGGCAAAGCA GCTGGCCTTC
CTGCAGGAGA TCGGTTGCCA CCAGGGGCAG GGCTTCCTGT TCGCACGGCC GCAGCCCGCC
GACCGACTGG TCGGCATCTC GTCGCGCCGC GGCGCTGAGT TGCTTGCAGA GTGA
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| Protein sequence | MYPNSYDVPI ARLVARQILS CAPATPVREV ARRMFAERCS SIVVMKDEQV VGIWTEHDAL
SAGDNPRDLD RPVSEVMSHP VLTIEANTPL GEAALKFKQS GVRHFVVVRD GTAIGVLTQT
DIVVNQGAEF FLHLKPIESI RVHPPVVVPE QATLHEVIAR MRAQRLDAIL VGYDDGEHGI
LTERDIVRLL ADGGADGAVG AYASKPLQML TAKQSLYAAQ RFMTEHNMRH VGIQDEGGRL
TGLLCFADVL QSIEHEYANE LRSALRERDE ALGLARFNLR MADRVFESAL EGIMVTDRHA
KIERVNQAFT RLTGYTEDEV VGRNPGLLSS GRQTPDFYKQ LWHSLTTDGH WQGEIWNRRK
TGELFLEYLT ITSIRDSEGE ISHYAAIFSD ITQRRQAEER LGYLATHDVL TNLANRMLFE
ERLTHAIVHA KRLGRKVAVM YLDLDRFKLV NDTLGHNAGD EVLKMVAERI VANVRANDTV
ARMGGDEFAL VLEEVDDVRD VGRVARKLLD EVGRAIDIVD RQIFVTPSIG ISIYPDDGTE
AEDLILLADQ AMYGAKNRGR NVFQFFESKM TSSAIEQLET LGELHRALEQ NEFRLFYQPQ
YDLASGRIVG VEALLRWLHP RRGLVPPGDF IGLAERSALI VPIGRWVLHE ACRQARCWLD
EGFAFGRVSV NVSARQCFTD HFLSDLTTIL SETALPAEYL QLELLESMAM NTREEIGILL
RELATRGISL AIDDFGTGYS SLVYLKDLPV DTLKIDQSFL TDCGSGSTDD AIVRAIVAMG
RALGLDVVME GVETAKQLAF LQEIGCHQGQ GFLFARPQPA DRLVGISSRR GAELLAE
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