| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6168 |
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| Symbol | |
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| ID | 6182587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 751000 |
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| End bp | 751872 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689296 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001816155 |
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| Protein GI | 172065443 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACC TGCCTCCCCG CTGGCCGGAC GCGAAGCGCG CGTGCGTCGC GCTCGCGTTC
GATCTCGACG GCCCGACCGG CGACGCGATG CTGAACGGGT CGATCTGGCG CAACCCCGCA
TATTTCACGC TCGGCAGCTA CGGGCCGTGG CGCGCACTCG GACGGCTGCT CGACCTGCTT
GCATCGTTCG GCCTGCCCGC GACGTTCTTC GTGCCCGCGT GGGTCGCGCG GACCTGGCCC
GACCAATGCG CGGCCATCGT CGAGCGCGGC CACGAGATCG GATATCACGG TTACCGGCAC
GAAGCGTTCT GGGCGCTCGA GCCCTGGCGG CAGCGCGAGA TCATGGCACA GTCGGCCGAC
ATCTTCGAGC GCACGCTCGG CGTGCGGCCG GTCGGGTTCC GCACACCGTC CGGCGACTGG
AGCGACGCTA CGGTCGCGGT GCTGCGCGAA GCGGGCGTGC GCTATTCGAG CTCGATGCGT
GGCGACGACC GTCCGTACCT GCTGCCCGGC GCGGACGGCG AACCGCCGCT CGTCGAGATT
CCCGGGCGCT GGGAGACCGA CGATTACGCG TCGCTTGCGT ATCACCGCAA CCCCGACTAT
CCGGCCGGGC TCGACCGGAT CGGCGGCTAC GAGGCGACGC TCGACAACTG GACGCGCGAA
TTCGACGGGA TATGCCGCGA AGGGCTGTGT CTGACGACGC TGCTTCATCC GAAGGTCTGC
GGCAAGCCGG GGCGCATCGC GCTGCTGGAG GCGTGGCTCG GCCACATGTG CGCGCAGGAT
GGCGTCTGGT TCGCGCGCTG CCGCGACGTG GCCGACTGGT GGCTCGCGCA GCACGCGCAT
GGCGCGCAAC CCACGCACCG GAGCGACATG TGA
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| Protein sequence | MTDLPPRWPD AKRACVALAF DLDGPTGDAM LNGSIWRNPA YFTLGSYGPW RALGRLLDLL
ASFGLPATFF VPAWVARTWP DQCAAIVERG HEIGYHGYRH EAFWALEPWR QREIMAQSAD
IFERTLGVRP VGFRTPSGDW SDATVAVLRE AGVRYSSSMR GDDRPYLLPG ADGEPPLVEI
PGRWETDDYA SLAYHRNPDY PAGLDRIGGY EATLDNWTRE FDGICREGLC LTTLLHPKVC
GKPGRIALLE AWLGHMCAQD GVWFARCRDV ADWWLAQHAH GAQPTHRSDM
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