Gene BamMC406_6166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6166 
Symbol 
ID6182585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp749275 
End bp750078 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID641689294 
ProductABC transporter related 
Protein accessionYP_001816153 
Protein GI172065441 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CGACCCTCAA CCCTCGGGAG AACGTCATGA CGAACGCGGT CGTTCGCGCG 
GTCGACGTAC GCAAGTCGTA CGGCGATTTC CAGGCGCTGC ACGGCATCAC GCTCGACGTC
GAGCCGGGCG AAGTGCTGTG CATCATCGGG CCGTCGGGCT CGGGCAAGAG CACGTTCCTG
CGCTGCATCA ACCAGCTCGA GACGATCAGC GCCGGCGCGC TGTGGGTCAA CGGCGAACTG
GCCGGCTACC GCCGCGCCGG CGACCGGCTC CACGAACTGT CGGAACGCCA GATCGCGCGC
CAGCGGCTCG CGACGAGCAT GGTGTTCCAG CGCTTCAACC TGTTTCCGCA CAAGACCGCG
CTCGAGAACG TGATCGAAGG CCCGGTGCAG GTGCTCAAGC GCCGGCGCCC GCAAGCGGAG
GAGGAAGCGC GCGCGCTGCT CGCGCGCGTC GGGCTCGCGC ACAAGTGCGA CGCGTTTCCG
GTCGAGCTGT CCGGCGGCCA GCAGCAGCGC GTCGCGATTG CGCGGGCGCT CGCGATGCAT
CCGCAACTGA TCCTGTTCGA CGAACCGACG TCGGCGCTCG ACCCCGAACT GGTCGGCGAA
GTGCTGGCCG TGATGCGCGA CCTCGCGAAG AGCGGGATGA CGATGATCGT CGTCACGCAC
GAGCTCGGGT TCGCGCGCGA GGTGGCCGAC CGCGTGGTGT TCATGGACGG CGGCCGGATC
GTCGAGAGCG GGCCGCCCGA CCAGGTGCTG TCCGCGCCGA CACATGCGCG CACGCGCGAG
TTCATCTCCG CCGTGATTGC ATGA
 
Protein sequence
MNDTTLNPRE NVMTNAVVRA VDVRKSYGDF QALHGITLDV EPGEVLCIIG PSGSGKSTFL 
RCINQLETIS AGALWVNGEL AGYRRAGDRL HELSERQIAR QRLATSMVFQ RFNLFPHKTA
LENVIEGPVQ VLKRRRPQAE EEARALLARV GLAHKCDAFP VELSGGQQQR VAIARALAMH
PQLILFDEPT SALDPELVGE VLAVMRDLAK SGMTMIVVTH ELGFAREVAD RVVFMDGGRI
VESGPPDQVL SAPTHARTRE FISAVIA