| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6159 |
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| Symbol | |
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| ID | 6182578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 742382 |
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| End bp | 743209 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641689287 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001816146 |
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| Protein GI | 172065434 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT ATGAAGTTCG CGACCGAGTC GTCGCCATAA CAGGCTCTAC TGGCGGGCTG
GGAGGCGGTC TTGCTCGTGC GCTGGTCAAC AAAGGAGCGC GAGTCGCACT TCTCGATATT
GACCGCCGTG CGCTGCATGC GCAACAAGCG TCACTTGGGC AATCGGCCTT CGCGTTTGAA
ACCGATGTCC GTTCGATGAG CAGCGTCAAT GACGCAATGA ACGCGGCCGC AGAGCATTTT
GGCGGAATTG ACATCGTAAT CGCGAATGCC GGAATCGATT ACGTCGAGCC TTTGATCTCG
GCAGATCCAG GAAATTTCGA GCGTGTCATA GATATCAACT TGACCGGCGT GTGGCGGACG
TTCCGTTCGA GTATTCCATA TGTGGCGCAA CGACAAGGCT ATCTTATGGC GGTTTCTTCC
ATGGCTGCTT TCGTTCATTC ACCATTGCAA GCCCACTACA CGGCAAGCAA GGCTGCGGTG
TGGGCGATGT GTAACAGCAT TCGACTCGAG GTCCGACACA TGGGGGTCGA CGTCGGAAGC
GTGCATCCCA CATTCTTCCA AACTCCCATG ATGGAACAAG TTCATTCCGA CAAGGCGGGA
TTGAAATTGT GGGGAGGAAA TCGTGGCGGA ATTTGGAAAA TGATTTCGAT CGAAAGCGTG
GTGGATGGCA TTGTCAACGG AATCGAGAAC CGTAGAGACA TGGTCGTGCT GCCGAAACAA
AACGCATTGA TTGCCAGAGC CCCGGGGTTA TTCCGTCCGC TGATCGAAGC TATTGGCTTC
AAAGAGAAGG ATGTCAGGGA AGCAATCGAG ATCTCGACGC GACGTTGA
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| Protein sequence | MKKYEVRDRV VAITGSTGGL GGGLARALVN KGARVALLDI DRRALHAQQA SLGQSAFAFE
TDVRSMSSVN DAMNAAAEHF GGIDIVIANA GIDYVEPLIS ADPGNFERVI DINLTGVWRT
FRSSIPYVAQ RQGYLMAVSS MAAFVHSPLQ AHYTASKAAV WAMCNSIRLE VRHMGVDVGS
VHPTFFQTPM MEQVHSDKAG LKLWGGNRGG IWKMISIESV VDGIVNGIEN RRDMVVLPKQ
NALIARAPGL FRPLIEAIGF KEKDVREAIE ISTRR
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