| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6148 |
|---|
| Symbol | |
|---|
| ID | 6182305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 732824 |
|---|
| End bp | 733855 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641689276 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001816135 |
|---|
| Protein GI | 172065423 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.860776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCG TCTATCGTGC GATGCAAATA ACGCGCCCCG GCTTCCTTGA ACTAGTGGAA
CGTCCGACAC CCACACCGGG CACCGGCGAA GTGTTGATCG AAGTAGAGGC CTGCGGCATC
TGCGGCGCCG ACGTCGGCGA CGTCGAAGGA GCCAGTACGG AAGTACAACC GCCGCGTGTG
CCCGGTCACG AGGTGGTCGG ACGCATCGTG GCGCTCGGTG CGCATGTTCC CTCCATCTGG
AAGGTGGGTC AGCGCGTGGG GGTTGGTCGC CTGGGCGGAC ATTGCAACGA ATGTGTCCAG
TGCCGAAAGG GACACTTTCA GCTCTGCCAG AATCAACCTT TCGTCGGCGC AACATGCGAC
GGTGGGTATG CCGAAATGAT GCTGGCACGC GCTACCGGGC TCGTATCTAT TCCGGACGAA
CTCGATGCCG AGGAAGCGGC GCCGATTCTC TGCGCCGGCA TCGCCACGTT CAACGCGCTG
AAGAAGTGCG GTGCCGAAGC TGGCGACACG GTCGTCGTCC TGGGTATCGG CGGCTTGGGA
CATATGGCGC TGCAGTACGC ACGCCGCATG GGGTTCCGAG TCGTCGCTGT CGGACGAGGC
AACGACATCG CCGATGACGC GCTCGCGCTC GGCGCACACA TCTACATCGA CACCGAGCAG
GAAGATGCAG TGGCCAAGCT CGGCAGCATG GGCGGCGCGC AGGCCATTTT GACCACGATC
GCTCATCCGG GCACCGTGTC GGCGCTGATG GCTGGCCTCG CACCGCAAGG ACGGTTGGTA
TTACTGGGCG CCGGCAAGGA TCCGTTGCCT GTTTCGACCG GCCAAATGGT CGTCGGCGAG
CGCAGCATGC TCGGCTCCAT CACCGGCACG CCGTACGAAA ATGAGTCGAC GCTTTCCTTT
AGCGTGCTCG CCGGGGTTCG TCCGAAGATC GAGGTCATGC CGCTGGAACA GGCCAACGAC
GCATACCGAC GGATGAAATC GGGCGACGTC AAGTTTCGCA TGGTCTTGAC AACGAGTGCA
CACCGGAAGT GA
|
|---|
| Protein sequence | MKTVYRAMQI TRPGFLELVE RPTPTPGTGE VLIEVEACGI CGADVGDVEG ASTEVQPPRV
PGHEVVGRIV ALGAHVPSIW KVGQRVGVGR LGGHCNECVQ CRKGHFQLCQ NQPFVGATCD
GGYAEMMLAR ATGLVSIPDE LDAEEAAPIL CAGIATFNAL KKCGAEAGDT VVVLGIGGLG
HMALQYARRM GFRVVAVGRG NDIADDALAL GAHIYIDTEQ EDAVAKLGSM GGAQAILTTI
AHPGTVSALM AGLAPQGRLV LLGAGKDPLP VSTGQMVVGE RSMLGSITGT PYENESTLSF
SVLAGVRPKI EVMPLEQAND AYRRMKSGDV KFRMVLTTSA HRK
|
|---|
| |