Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6130 |
Symbol | |
ID | 6182332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 712468 |
End bp | 713370 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641689258 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001816117 |
Protein GI | 172065405 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.733212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCC GCTCCGTAGA TTTGAACCTG CTTGTCATCT TCGATGCGCT CATGCGGGAG CGGAATGTGA CGCGGGCCGC GCTGAGAATT CCGATGAGTC AGCCTGCCAT GAGCAACGCG CTGTCCAGAC TTCGTCATCT GTTCAAGGAC GATCTGTTCA TTCGTTCCGG CGGAGCGATG GAGCCCACGC CGCGGGCGAT TGAACTCGGT GAGTCCGTGC GGCAGATTCT TCGGCAGACA GAGCGGCTGA TGTCGAGCGA CGTCAATTTC GATCCCGCGA CGAGCGAGCG TGAATTCACC GCGCGAATGT CCGATCTGGT CGGTTGCCTG TTGTTGCCCC AACTACTCGC GACGTTGTCG GAATCCGCAC CACGCGTCAC GCTGGACGTA CTCCACCTGT CACCGGAGCG TACGATCAAG GCGCTGGAAA GCGACGAACT GGATTTCGGC GTCAGCATGC AATTGCAACC CGCGCCGAAT ATACGGAGCG AGAAGCTGTT CATGGACCAG ATGGTGTGCG TCATGCGCGC CGATCACCCG CTGACGAAGG GCAAGCTGAC GCTCCAGCGT TTTCTGAATG CAGATCATCT TCGGGTGGCG ATGAGCCCGA CCGACATACG TTTTGTCGAT AACGTCCTGG CCGACCAGGG TTATTCCCGG AATGTGGTGG CGAAGGTCCC GCATTGGCTG CTGATCCCGC CGATCCTTCG CGAGACTCAA CTGATCGCCG TCATTTCCGG CAAGCTGGCT GCGCGTTTCG CATCGGAACC ATTGGCGGTG CGCGCGTTGC CGTTCCCGTC GGAGCCATTC TCGTGGGACA TCTACTGGCA TCGTCGCAAC GACAACAGCG TGGCGCACAA ATGGATGCGG AGCCTGATTG CCAGTACCTG CGCCTCGCTC TGA
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Protein sequence | MNLRSVDLNL LVIFDALMRE RNVTRAALRI PMSQPAMSNA LSRLRHLFKD DLFIRSGGAM EPTPRAIELG ESVRQILRQT ERLMSSDVNF DPATSEREFT ARMSDLVGCL LLPQLLATLS ESAPRVTLDV LHLSPERTIK ALESDELDFG VSMQLQPAPN IRSEKLFMDQ MVCVMRADHP LTKGKLTLQR FLNADHLRVA MSPTDIRFVD NVLADQGYSR NVVAKVPHWL LIPPILRETQ LIAVISGKLA ARFASEPLAV RALPFPSEPF SWDIYWHRRN DNSVAHKWMR SLIASTCASL
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