Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6129 |
Symbol | |
ID | 6182331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 711089 |
End bp | 712345 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641689257 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001816116 |
Protein GI | 172065404 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCGG GATTCGCAAC GTTCGATAGC GGCACGTCAG CACGCCCCCT TGCGGGAATA CGGATTATCG ATCTAACCCG AGTCGTGTCA GGCCCATTCG CGACCATGCA TCTGGCCGAC CTCGGCGCCG ATGTCATCAA GATCGAGGAA CCCACCAGCG GGGACGACAG CCGAGCGTTC GGGCCGCCGT TCGTCGCAGG CGAAAGCGCC TACTTTCTGT CCGTCAACCG TAACAAGCGT AGTTGTGCGA TCGACCTGAA GAGCGACGCG GGACGACAGA TTCTTCTGAG AATGATCGAG ACCGCGGATG TCGTCGTTGA CAACTTCCGA CCCGGCGCCA TGAAGCGCCT TGGCCTCGAT CACGAGACGT TGCGAAGTAT CAATCCCCGG TTGATCTGTT GCTCGATCTC TGGTTTCGGC TCACAAGGGC CCGATGCGCA GCGCCCCGGT TACGATCTGA TCGTGCAGGG TGAAGCCGGC GTCATGGACA TCACCGGCGA CCCCAGCGGC CAACCGACCA AGGTTGGCAC CTCGATCGCG GACATGATTG CAGGCCTCTT CGCCGTACAA GGCATCCTCT CTGCACTGTA CGAACGAAAT CGAACTGGCG TTGCACGCTC GGTTCAAATT TCAATGCTCG ATGCACTCGC TTCGTTGCTC ACCTTCAACG CGGGCATTTA CTTCTCCACC GGGTCATCGC CGACCCGACG AGGTAACGAA CACCCGACCA TCTGCCCGTA TGAGACCTTC CAGGCCTCCG ATGGATGGAT CAATCTGGGT GTGGCGAACG ACAAATTCTG GAAACTGTTC TGCGAGGTGG CCAACGCCTC CGATCTGGTC GACGATCCAT GCTTTGCAAC CGCACCACTG CGCGTGAGCA ATCGACACGA GTTGCGGCCG TTGGTTGCCG CGCTCCTCCG GGGCAACAGC AGAGCTTATT GGGTCGAAAA GTTGGGTAAC GCTGGCGTCC CGTGCGGCTT GATTCGGACA GTGGGCGAAG TGTGTGAAGC TGCGCAACTG ACCGAGCGCG GGATGATTCT TTCGATGGAT CATCCCATTG CAGGGGTGGT GAAAAACATC ACAAACCCGG TTCGCCTGGA CGATGCGCCC ATGACCCACG CATCGCCACC ACCGATGCTG GGCCAGCACA CGCGTGAGAT CCTCGAATCG CTTCTCGGGC TCTCCGCGCA TCAACTCGAT GAGCTGGCCG CTCGGGGCGT GATTCGCGAT CGGGCGGAGC AAACCGCTCA ACAATAG
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Protein sequence | MDSGFATFDS GTSARPLAGI RIIDLTRVVS GPFATMHLAD LGADVIKIEE PTSGDDSRAF GPPFVAGESA YFLSVNRNKR SCAIDLKSDA GRQILLRMIE TADVVVDNFR PGAMKRLGLD HETLRSINPR LICCSISGFG SQGPDAQRPG YDLIVQGEAG VMDITGDPSG QPTKVGTSIA DMIAGLFAVQ GILSALYERN RTGVARSVQI SMLDALASLL TFNAGIYFST GSSPTRRGNE HPTICPYETF QASDGWINLG VANDKFWKLF CEVANASDLV DDPCFATAPL RVSNRHELRP LVAALLRGNS RAYWVEKLGN AGVPCGLIRT VGEVCEAAQL TERGMILSMD HPIAGVVKNI TNPVRLDDAP MTHASPPPML GQHTREILES LLGLSAHQLD ELAARGVIRD RAEQTAQQ
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