| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6127 |
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| Symbol | |
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| ID | 6182329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 709748 |
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| End bp | 710632 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641689255 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001816114 |
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| Protein GI | 172065402 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.986067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAT CTACGCTGTC CCCTTCCGAG CGCGCACGTC GAGACTCGAG TGACCGGCGA
CTGCTGGAAA GTGCGACGTC TTTTCTGTTC GTCCCTGGCG ATCGCCCCGA GCGTTTCCCG
AAAGCGCTGC AGAGCGACGC AAACGTCGTC ATCATCGACT GGGAGGCCTC GGTCATAGCG
TCCAGCAAGA ACGTCGCAAG ACACAACACA ATCGCATTCC TCGCTAACTC GGACGGCCGT
CGGGTAGCCA TCCGCGTCAA TCCCGTGAGT AGCAGCGACT TCAAGCTTGA TGCCTCTGCG
TTGCACCAGA TCTCCAGTCA AATCGCCGGC GTATTTGTGA CCATGGTCGA TTCGGCGGAT
CAAGTGACCA TGGCCCAGGA GGCACTTCCC CCCAACACGG CGCTTGTGGG AATGATTGAG
ACAGCGCGAG CGGTGGTCCG TGTCGACGAA ATCGCGTCTG CGAAGCCACT CTGCCGTCTT
GCATTTGGCA ACATGGACTA TCAGACCGAC GTCGACCTCC CGCCCGACGA GCACGTCGGC
CTGATATATC CGAGCTCGAG AATCGTTGTG GCTTCGCGTT CTGCTGGCCT GCCTGCTCCA
ATCGCCGGCG TCACCGAAAA TATTGCCGAC CTGCATGTAT TCGAACAATC TGCTCGCTTC
GAACGCAACC TCGGATTCCT CGGCAAGCTC TGCGTCCATC CAACTCAGCT CGCGTTGACA
CAAGCGATCT TCGCTCCTTC CGCAGCCGAA ATCGAATGGG CCGAGAGAGT CATTACTGCA
ACGCAAAATA CGCACGCGGT CATGATGGAC GGCCGCATGA TTGACCGACC GGTTATCGAA
CGGGCGAGGA AGATTCTGAA TCGCGCGAAA GTGGTTCTCG ACTAA
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| Protein sequence | MKPSTLSPSE RARRDSSDRR LLESATSFLF VPGDRPERFP KALQSDANVV IIDWEASVIA
SSKNVARHNT IAFLANSDGR RVAIRVNPVS SSDFKLDASA LHQISSQIAG VFVTMVDSAD
QVTMAQEALP PNTALVGMIE TARAVVRVDE IASAKPLCRL AFGNMDYQTD VDLPPDEHVG
LIYPSSRIVV ASRSAGLPAP IAGVTENIAD LHVFEQSARF ERNLGFLGKL CVHPTQLALT
QAIFAPSAAE IEWAERVITA TQNTHAVMMD GRMIDRPVIE RARKILNRAK VVLD
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