Gene BamMC406_6127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6127 
Symbol 
ID6182329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp709748 
End bp710632 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content58% 
IMG OID641689255 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001816114 
Protein GI172065402 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.986067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAT CTACGCTGTC CCCTTCCGAG CGCGCACGTC GAGACTCGAG TGACCGGCGA 
CTGCTGGAAA GTGCGACGTC TTTTCTGTTC GTCCCTGGCG ATCGCCCCGA GCGTTTCCCG
AAAGCGCTGC AGAGCGACGC AAACGTCGTC ATCATCGACT GGGAGGCCTC GGTCATAGCG
TCCAGCAAGA ACGTCGCAAG ACACAACACA ATCGCATTCC TCGCTAACTC GGACGGCCGT
CGGGTAGCCA TCCGCGTCAA TCCCGTGAGT AGCAGCGACT TCAAGCTTGA TGCCTCTGCG
TTGCACCAGA TCTCCAGTCA AATCGCCGGC GTATTTGTGA CCATGGTCGA TTCGGCGGAT
CAAGTGACCA TGGCCCAGGA GGCACTTCCC CCCAACACGG CGCTTGTGGG AATGATTGAG
ACAGCGCGAG CGGTGGTCCG TGTCGACGAA ATCGCGTCTG CGAAGCCACT CTGCCGTCTT
GCATTTGGCA ACATGGACTA TCAGACCGAC GTCGACCTCC CGCCCGACGA GCACGTCGGC
CTGATATATC CGAGCTCGAG AATCGTTGTG GCTTCGCGTT CTGCTGGCCT GCCTGCTCCA
ATCGCCGGCG TCACCGAAAA TATTGCCGAC CTGCATGTAT TCGAACAATC TGCTCGCTTC
GAACGCAACC TCGGATTCCT CGGCAAGCTC TGCGTCCATC CAACTCAGCT CGCGTTGACA
CAAGCGATCT TCGCTCCTTC CGCAGCCGAA ATCGAATGGG CCGAGAGAGT CATTACTGCA
ACGCAAAATA CGCACGCGGT CATGATGGAC GGCCGCATGA TTGACCGACC GGTTATCGAA
CGGGCGAGGA AGATTCTGAA TCGCGCGAAA GTGGTTCTCG ACTAA
 
Protein sequence
MKPSTLSPSE RARRDSSDRR LLESATSFLF VPGDRPERFP KALQSDANVV IIDWEASVIA 
SSKNVARHNT IAFLANSDGR RVAIRVNPVS SSDFKLDASA LHQISSQIAG VFVTMVDSAD
QVTMAQEALP PNTALVGMIE TARAVVRVDE IASAKPLCRL AFGNMDYQTD VDLPPDEHVG
LIYPSSRIVV ASRSAGLPAP IAGVTENIAD LHVFEQSARF ERNLGFLGKL CVHPTQLALT
QAIFAPSAAE IEWAERVITA TQNTHAVMMD GRMIDRPVIE RARKILNRAK VVLD