| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6126 |
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| Symbol | |
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| ID | 6182328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 708091 |
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| End bp | 709800 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641689254 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001816113 |
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| Protein GI | 172065401 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.939433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGCG GAATCGACCA TCACGGAGAC GCAGTTGAAG AGTTTGATTA CGTCATCGTC
GGCGCGGGTT CGGCCGGATG TACGCTAGCC GCACGGTTAA GCGAGGATGC CAGCGTTTCC
GTGCTTCTGC TCGAGGCCGG CGGGCGAGAC AAAAATATCT GGATTCATAT CCCGGTCGGG
TATATCAAGA CGCTGGATAT GCCGCGGCTC AACTGGAGAT TCTGGTCCGA ACCTGATCCT
TACACTTACA ATCGACCGAT TTCGATTCCG CGCGGCCGTG TGCTCGGTGG GACGAGCTCT
ATCAATGCGA TGCTTTATGT GCGCGGCGAG AGGCAAGACT ACGACGGTTG GGTTGCGCTT
GGGAACCGCG GCTGGTCGTG GGACGAGGTT CTGCCGTACT TCTGCAAAGC GGAGAACTGG
GAGGGTACGC CGGCACCGTG GCGCGGAAGA GGCGGGCCTT TGAATACCCG GGATCTCTAC
GAGCATGGTG AAGTTCCCGA TGCGATCATT GCCGCCGCAG CGCAGTGTGG TTATCCGGTC
AATCCGGATT ACAACTCGGG TGACACGGAA GGGTTCGGAT ACTTTCAGGT TACGCAAAAA
GATGGCCGTC GCTGGTCGAC TAGCCGGGCA TATTTGCGGC CCGCGATGGC GCGTCCGAAT
CTCAAGGTTG AAACTGAAGC ACACGCCACT TCGGTCACGT TAGCGGGAAA ACGCGCAACA
GGTGTCACGT TTGTGCAACG AGGGCGAGCT CGTGCCGTCA AGGCTCGTCG AGAGGTGATA
TTGGCGGCTG GCGCGGTGCA GTCGCCGCAG CTTCTGGAGC TCTCCGGCAT CGGGAACCCC
GAAATTTTGC GAGCTCACGG GATACCGGTG CGTCACGCGT TGCCTGGGGT GGGCGAGAAC
TACCAGGACC ACTTCATCGT GCGCATGTCC TGGCGGGTAA CCAGGCCGAT CACGGTTAAC
GAAAAGGTGC ATGGTCTGAA CCTCGCTAAA GAGGTCGTCA AGTATGCGTT CAAGCGACGC
GGTGTGCTTA CGTTCGCAGC AGGGGTGGTG TGCGGTTATG TGCGTACCCG ACCTGACGTT
GCGACGCCGG ACATCCAATA TACGATTGCT GACGCGACAT TCAAGGATCC CGTGAAGCGG
GTGTTGGACC CGGAGCCGGG CATGACCATT GGCCCGTCTC CGTTGCGACC GGTCAGTCGC
GGGTCGATTC ACATTGCGTC GGCGGATCCG AGGGCTGCGC CCAAAATATG TCCAAATTTC
CTGCATGCGG AAAGCGATCG TGTGACGCTT GTGGATGGCA TGAAGATCGC GCGGCAAATT
GCTGCTGCAC CTGCGCTTTC ATCGTATATC TCGCACGAAG TGGGGCCCGG GTCCTCGGCT
GGCAGTGACG ACGAGCTGCT CGATTTTGCC AGGCGAACCG GGGCCACGAT TCATCACCCT
GTCGGAACGG CGAAGATGGG GGGCGACGAG ATGGCGGTGG TCGACGAGCG ACTTCGGGTG
CGTGGTATCG ACGGATTGCG TGTAGTCGAC GCATCCATCA TGCCGACAAT CGTGTCCGGC
AATACAAATG CGCCTGTCAT CATGATTGCC GAGAAGGCAT CGGACATGAT CAAGCAGGAC
GCGAAAAATA ACACCGGTGG AAGCAGCAAG ATATCGATTA GTCGAGAACC ACTTTCGCGC
GATTCAGAAT CTTCCTCGCC CGTTCGATAA
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| Protein sequence | MESGIDHHGD AVEEFDYVIV GAGSAGCTLA ARLSEDASVS VLLLEAGGRD KNIWIHIPVG
YIKTLDMPRL NWRFWSEPDP YTYNRPISIP RGRVLGGTSS INAMLYVRGE RQDYDGWVAL
GNRGWSWDEV LPYFCKAENW EGTPAPWRGR GGPLNTRDLY EHGEVPDAII AAAAQCGYPV
NPDYNSGDTE GFGYFQVTQK DGRRWSTSRA YLRPAMARPN LKVETEAHAT SVTLAGKRAT
GVTFVQRGRA RAVKARREVI LAAGAVQSPQ LLELSGIGNP EILRAHGIPV RHALPGVGEN
YQDHFIVRMS WRVTRPITVN EKVHGLNLAK EVVKYAFKRR GVLTFAAGVV CGYVRTRPDV
ATPDIQYTIA DATFKDPVKR VLDPEPGMTI GPSPLRPVSR GSIHIASADP RAAPKICPNF
LHAESDRVTL VDGMKIARQI AAAPALSSYI SHEVGPGSSA GSDDELLDFA RRTGATIHHP
VGTAKMGGDE MAVVDERLRV RGIDGLRVVD ASIMPTIVSG NTNAPVIMIA EKASDMIKQD
AKNNTGGSSK ISISREPLSR DSESSSPVR
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