| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6125 |
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| Symbol | |
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| ID | 6182327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 707358 |
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| End bp | 707927 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641689253 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001816112 |
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| Protein GI | 172065400 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAC TTCGATTGGA ACGCCGTGCC GCAGTCGCGC ACCTGCTTGA TGGCAGGAAG
GAATCGATCG TCGTCGCGGG CCTGGGATCA CCGATCTACG ATGTCTTTGC GGCGGGCGAT
CATTCGCTCA ATTTCTACGA CTGGGGCGCG ATGGGCTCAG CAGCCATGGT GGGCCTCGGT
CTCGCCCTTG CACAGCCGCA GCGTCCCGTC ATCGTATTCA CTGGCGACGG CGAGATGCTC
ATGGGCCTGG GTGCGTTCGC GACGATCGCT CAACATTGCC CGCCGAACCT CGCAATCGTC
GTGCTCGACA ACGAACAGTA TGCGGAAACA GGAATGCAGC GTACCGCGAC AGGCATCGGA
ACTGATCTGG CTGCAGTGGC CAGGGGCTGT GGGCTCAAGA ATGCGGTCAC ACTTACCTCG
GACAGTGAAT TGACATTGCT GAAGGAGAAA ATTCAGGCGT GCGATGGCAC GAAAGTCGCG
GTCCTGAAGA TCGTACCGGG TGACCAGCCG AGAACGATTC CGATGCGGGA TGGTGCAGCG
ATCGCAAACC GCTTCATTCT CGCTCTGTAG
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| Protein sequence | MNELRLERRA AVAHLLDGRK ESIVVAGLGS PIYDVFAAGD HSLNFYDWGA MGSAAMVGLG
LALAQPQRPV IVFTGDGEML MGLGAFATIA QHCPPNLAIV VLDNEQYAET GMQRTATGIG
TDLAAVARGC GLKNAVTLTS DSELTLLKEK IQACDGTKVA VLKIVPGDQP RTIPMRDGAA
IANRFILAL
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