Gene BamMC406_6121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6121 
Symbol 
ID6182323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp702640 
End bp703509 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content59% 
IMG OID641689249 
ProductAraC family transcriptional regulator 
Protein accessionYP_001816108 
Protein GI172065396 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.365248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCT TGCGATCTGG CGACAAATCC GCTGCCCCAA CTACACGGAA GGAAACCGGG 
CGTGTCGAGC GCTCGGGATC CGGGCGGGAC TGGATGCGCG TATCTTCCGA CGATGCCCTT
TTTTATCGAA TCGAGGCTTT TTTCAGAGGC CGAGCGTATG GCCCGCATCG TCACGACACT
TACGCAGTCG GGATAACCAC CGCCGGAATT CAATCGATCC GCTATCGGGG CGAATTGGTG
CATAGCTCAC CGGGCGATGC CGTCGTCATT CACCCGGACG AGATACACGA TGGGCGGGCC
GGAACGGTTG CTGGATATTG CTATCGCATC GTTCATCTGC AGCCGGAAGT GCTTCAGCAA
ATTCTCGGCC AAACTTCCCT TCCGTTCATC AAGGAAGGCG TGTCGCAAAA CGCGCAGCTA
TATCAAGCGA TATGGGCGAT GCTCAGAGAG TTCGACCGCC CGCTTGAACC GCTCGAGCGT
ACAGACCTAC TGTTTGATCT GGCTATGGCC CTGCAGGCCG CTGCCGGGGC AGCCAAAGCA
AAGCACACCG GCAACATCAA GGCAGCGCTG ATTGCCCGCG ATTGCATCCG GAGCGCGCCT
AGCCAGCGGA TCGAGTTGGA TGTGCTCGCG AGGGAGAGTG GACGCGACCG ATGGAGCCTC
TCGCGCGACT TCCGGCAGTT CTTTGGAACG AGCCCTTCCA GATACATGAC AATGCGTCGA
CTGGATATCG CCAGGCGTCT GATGTCGAAT GGCACGCCGC TAGCCGAGTG TGCGGCCGCG
GTGGGCTTTG CGGATCAAAG TCATATGTCT CGTCAGTTTG TCGAGGCGTT TGGACTGACG
CCGACTCGAT GGCTGACTAT GTTGCGATGA
 
Protein sequence
MASLRSGDKS AAPTTRKETG RVERSGSGRD WMRVSSDDAL FYRIEAFFRG RAYGPHRHDT 
YAVGITTAGI QSIRYRGELV HSSPGDAVVI HPDEIHDGRA GTVAGYCYRI VHLQPEVLQQ
ILGQTSLPFI KEGVSQNAQL YQAIWAMLRE FDRPLEPLER TDLLFDLAMA LQAAAGAAKA
KHTGNIKAAL IARDCIRSAP SQRIELDVLA RESGRDRWSL SRDFRQFFGT SPSRYMTMRR
LDIARRLMSN GTPLAECAAA VGFADQSHMS RQFVEAFGLT PTRWLTMLR