| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6121 |
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| Symbol | |
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| ID | 6182323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 702640 |
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| End bp | 703509 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641689249 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001816108 |
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| Protein GI | 172065396 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.365248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCT TGCGATCTGG CGACAAATCC GCTGCCCCAA CTACACGGAA GGAAACCGGG
CGTGTCGAGC GCTCGGGATC CGGGCGGGAC TGGATGCGCG TATCTTCCGA CGATGCCCTT
TTTTATCGAA TCGAGGCTTT TTTCAGAGGC CGAGCGTATG GCCCGCATCG TCACGACACT
TACGCAGTCG GGATAACCAC CGCCGGAATT CAATCGATCC GCTATCGGGG CGAATTGGTG
CATAGCTCAC CGGGCGATGC CGTCGTCATT CACCCGGACG AGATACACGA TGGGCGGGCC
GGAACGGTTG CTGGATATTG CTATCGCATC GTTCATCTGC AGCCGGAAGT GCTTCAGCAA
ATTCTCGGCC AAACTTCCCT TCCGTTCATC AAGGAAGGCG TGTCGCAAAA CGCGCAGCTA
TATCAAGCGA TATGGGCGAT GCTCAGAGAG TTCGACCGCC CGCTTGAACC GCTCGAGCGT
ACAGACCTAC TGTTTGATCT GGCTATGGCC CTGCAGGCCG CTGCCGGGGC AGCCAAAGCA
AAGCACACCG GCAACATCAA GGCAGCGCTG ATTGCCCGCG ATTGCATCCG GAGCGCGCCT
AGCCAGCGGA TCGAGTTGGA TGTGCTCGCG AGGGAGAGTG GACGCGACCG ATGGAGCCTC
TCGCGCGACT TCCGGCAGTT CTTTGGAACG AGCCCTTCCA GATACATGAC AATGCGTCGA
CTGGATATCG CCAGGCGTCT GATGTCGAAT GGCACGCCGC TAGCCGAGTG TGCGGCCGCG
GTGGGCTTTG CGGATCAAAG TCATATGTCT CGTCAGTTTG TCGAGGCGTT TGGACTGACG
CCGACTCGAT GGCTGACTAT GTTGCGATGA
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| Protein sequence | MASLRSGDKS AAPTTRKETG RVERSGSGRD WMRVSSDDAL FYRIEAFFRG RAYGPHRHDT
YAVGITTAGI QSIRYRGELV HSSPGDAVVI HPDEIHDGRA GTVAGYCYRI VHLQPEVLQQ
ILGQTSLPFI KEGVSQNAQL YQAIWAMLRE FDRPLEPLER TDLLFDLAMA LQAAAGAAKA
KHTGNIKAAL IARDCIRSAP SQRIELDVLA RESGRDRWSL SRDFRQFFGT SPSRYMTMRR
LDIARRLMSN GTPLAECAAA VGFADQSHMS RQFVEAFGLT PTRWLTMLR
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