Gene BamMC406_6119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6119 
Symbol 
ID6182321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp700328 
End bp701266 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID641689247 
Producthypothetical protein 
Protein accessionYP_001816106 
Protein GI172065394 
COG category[C] Energy production and conversion 
COG ID[COG4313] Protein involved in meta-pathway of phenol degradation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC TCAGACGTCC GCACGGCGCG CCGCGCCGCG GCGCACGGAC GACCACCGTC 
GCAATCGGCG CATTGGCGGC GACGCTCGCA TGCAATCCCG CCCGCGCGCT CGAAAACGAT
GGCCCCATCA CGCCGTTCGG CGTGTTCGAT TTCGGCGCGG GAATCGCCCC GCCGCCCACG
CCCAACGGCA CGCTCGCGAC GCGCTTCGCG TATTACTCGA CGCACACGCT CCGCAACGGC
GGCAACGCCG ACTTCTCGCT GACTGCCGCG TCGTGGAGCC TCGCGTACAT CAGGATGACT
AACGTCAAAT TGTTCGGCGC CAACGTCGGC TTCGGCGCGA TCGTGCCGTT CCTGAACCTG
AACGGGCACG TAAACGTGCC GACACCGGCA GGAACGCTCG CGATGTCGGC CAATCCGACC
AATATCGGCG ATGCGGACTT CCAGCCGCTG ATCCTCGCGT GGACGCTGCC TAATCTGTTC
GTCAATATCG CGCTGCAGGC GCAGGCGCCG ACTGGTGCCT ATCGCGCGTC GCGACTCTTC
AATCCCGGCG TCAACCACTG GACCTTCTCG CCGATCATCG GTGCGACCTA CATCACCGAC
AGCGGATTCG AAATCTCGAC CAGCATCGAG ATCGACCAGA ACACGACCAA TCGCGCGACG
AACTACCGCA GCGGCACCGG CTCTCGCCAG GAATTTGCCG TCGGCCAGCA TATCGGCCCG
TTTACCGCGG GCCTCGGCGG CTACATCGAG CGGCAGTTGA GCAACGACCA TGGCCCGAAC
GTCGATGGCA ACCGCGCGCG CGTCAACGCG CTGGGCCCGG CGATCAGCTA CGTCGAACCG
GGCAGGCCCG CGATATGGCT GCACGCCTAC AAGGAGTTCG GTGCGCAAAA CCGCGCGCAG
GGGTACCAGG TCGCGCTGCG TGCGGCGCTG TCGTTCTGA
 
Protein sequence
MKILRRPHGA PRRGARTTTV AIGALAATLA CNPARALEND GPITPFGVFD FGAGIAPPPT 
PNGTLATRFA YYSTHTLRNG GNADFSLTAA SWSLAYIRMT NVKLFGANVG FGAIVPFLNL
NGHVNVPTPA GTLAMSANPT NIGDADFQPL ILAWTLPNLF VNIALQAQAP TGAYRASRLF
NPGVNHWTFS PIIGATYITD SGFEISTSIE IDQNTTNRAT NYRSGTGSRQ EFAVGQHIGP
FTAGLGGYIE RQLSNDHGPN VDGNRARVNA LGPAISYVEP GRPAIWLHAY KEFGAQNRAQ
GYQVALRAAL SF