Gene BamMC406_6115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6115 
Symbol 
ID6182317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp694920 
End bp695636 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID641689243 
ProductABC transporter related 
Protein accessionYP_001816102 
Protein GI172065390 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGG CAATGTTGAA AATCAAGGGC TTGCAGGTCA ACTACGGCGG CATCCAGGCC 
GTCAAGGGCG TTGACCTGGA AGTCCGTCAG GGCGAGCTCG TGACGCTGAT CGGCGCGAAC
GGCGCAGGCA AGACCACGAC GATGAAGGCG ATCACGGGTC TGAAGCCGTA TTCGGCGGGG
GACATCGAGT ACGACGGCAA GTCGATCAAG GGCGTGCCGT CGCACGAGTT GCTCAAGCGC
GGCCTCGCGA TGGTGCCGGA AGGCCGCGGG ATCTTCGCGC GGATGTCGAT CATCGAGAAC
ATGCAGATGG GCGCGTACCT GCGCAACGAC AACGAGCAGA TCAAGAAGGA CGTCGACCGG
ATGTTCGGCT TCTTCCCGCG TCTGAAGGAG CGGGCGACGC AGCTGGCCGG CACGCTGTCG
GGCGGCGAGC AGCAGATGCT GGCGATGTCG CGCGCGATTC TGTCCAAGCC GAAGCTGCTG
CTGCTCGACG AGCCGTCGAT GGGCCTGTCG CCGATCATGG TCGAGAAGAT CTTCGAAGTG
GTGCGCGAGA TCTCGAAGGA AGGCATCACG GTGCTGCTGG TCGAGCAGAA TGCGCGCCTC
GCGCTGCAGG CGGCCGACCG CGGCTACGTG ATGGACTCCG GCACGGTCAC GATGGAAGGC
GATGCGAAGC AGATGCTGGA CGATCCGAAG GTGCGGGCTG CGTATCTGGG TGAATGA
 
Protein sequence
MAAAMLKIKG LQVNYGGIQA VKGVDLEVRQ GELVTLIGAN GAGKTTTMKA ITGLKPYSAG 
DIEYDGKSIK GVPSHELLKR GLAMVPEGRG IFARMSIIEN MQMGAYLRND NEQIKKDVDR
MFGFFPRLKE RATQLAGTLS GGEQQMLAMS RAILSKPKLL LLDEPSMGLS PIMVEKIFEV
VREISKEGIT VLLVEQNARL ALQAADRGYV MDSGTVTMEG DAKQMLDDPK VRAAYLGE