Gene BamMC406_6111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6111 
Symbol 
ID6182220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp690765 
End bp691946 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content56% 
IMG OID641689239 
Productaminotransferase class I and II 
Protein accessionYP_001816098 
Protein GI172065386 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGATT TTAACGAGAT CATCGATCGG CGGCAGAGCA ACTCGATGAA ATGGGCCGAG 
GCCCGTAAAC GGCTTACCGC GGAACAATGC GCGGCCGACC CGTTACCGAT GTGGGTGGCT
GACATGGACT TCCGCGTCGC GCGGCCGATT CTGGATGCGA TGCATCGCGA ATTGGAGATG
GGGGTGCTTG GATACGGCGG CACACCAGAC TCCTATGTCG AGGCAGTGGT CAATTGGCAG
GCAAGTCGTT TTGGCTGGAA TGCGATGCCC GACTGGCTCA CACAGTCGCC AGGTGTCGTC
AGCGCGCTGA ATATGTCCAT TCAGGCGTTT ACGCAGCCTG GAGACTATGT GGTGGTACAA
ACGCCGGTCT ATTTCCACTT TCACTACGAC GTTGTCGTCA ATGGGCGTCG GCTGCTGCAA
GCCCCGCTCG TGCTTCAGGA CGGCAGGTAT CGGTTCGATC CCGACGTATT TGAAGCTGCT
TTGCGGCCTG GAACGAAACT CTTCATTCTC TGCAATCCAC ACAATCCGAC CGGTAATGTT
TGGACTCGAG ACGAACTACT AACGATGGCG TCCATTTGCG AGCGCCACGG TATTGTGGTT
GTCTCCGATG AAGTCCATCA GGATTTCGTA TTTGGTGAGG GCAGGCGGCA CGTTCCGTTC
GAGACCCTGG ACCATCCGGT CGCCAAGGAT TCGATCATCT GTACCGCACC AAGCAAAACG
TTCAACATTG CCGGCTTGGC GTGTGCAAAC ATCTTCATCG CTAACGAACG GATGCGTCGA
GCGTATCGCA CGCAATGCGA AAGGAGCGGA ATCTCACTCG TCAATACGAT GGGTACGGCT
GCTTGCGAAG CCGCGTATCG AGAATGCGGT CCTTGGGTCG ACGCAATGGT TGCATACGTT
AAATCCAACC AGGACTACTT TGCGAAAAGT GTTACGGAAC TGGGCCTGCC GCTAAAGGTT
ACTCCGACAG ATTCGTTATA TCTGGCGTGG CTCGATTTCC GTCCCTCGAG CATGCCGGCC
GACGATCTTC ACGACTTTCT TCTGCGTAAC GCACGGCTGT GGCTGGACCC GGGCACCAAG
TTCGGCGCCG GGGGAGAAGG CTTCATGCGA ATCAATCTTG CCTGTCCACG GAAGATTGTC
GATGAGGCGA TTGCGCGGCT TGGAAGAGCA TTCTTCGGTT GA
 
Protein sequence
MYDFNEIIDR RQSNSMKWAE ARKRLTAEQC AADPLPMWVA DMDFRVARPI LDAMHRELEM 
GVLGYGGTPD SYVEAVVNWQ ASRFGWNAMP DWLTQSPGVV SALNMSIQAF TQPGDYVVVQ
TPVYFHFHYD VVVNGRRLLQ APLVLQDGRY RFDPDVFEAA LRPGTKLFIL CNPHNPTGNV
WTRDELLTMA SICERHGIVV VSDEVHQDFV FGEGRRHVPF ETLDHPVAKD SIICTAPSKT
FNIAGLACAN IFIANERMRR AYRTQCERSG ISLVNTMGTA ACEAAYRECG PWVDAMVAYV
KSNQDYFAKS VTELGLPLKV TPTDSLYLAW LDFRPSSMPA DDLHDFLLRN ARLWLDPGTK
FGAGGEGFMR INLACPRKIV DEAIARLGRA FFG