| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6088 |
|---|
| Symbol | |
|---|
| ID | 6182199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 674684 |
|---|
| End bp | 675100 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641689218 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_001816077 |
|---|
| Protein GI | 172065365 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTC AATCCATTGC AGCTGCCGCC TGCGCCAGCA TCGCCTTGTG CATCGCGGTG
CCGGCCGCGG CACACGGCGC CGGTGAAACC GTCACGCCGA ACTTCCAGCA TGCGATTCCC
AACATTCCCG GCAAGTCGCT GACCGCCGTC GTCGTCGACT ACGCACCGGG CGCGGCGTCG
CCGGCTCACC GGCATGCAGG CTCGGCTTTC ATCTATGCGT ACGTCGTGTC GGGCGACATC
GAGTCTCAGG TGAACGACGG CCCGAAGCGC GTCTATCACG CCGGAGAAAG CTTCTTCGAG
GAGCCCGGCG CCGTTCATCG CGTGAGCCGC AATGCGAGCG AATCGCGGCC CGCCAGGTTG
CTCGCGGTAT TCGTCGCGGA CAGCAACGAC ACGGTCCTCA CCACCCCGGC CAAGTAA
|
|---|
| Protein sequence | MNLQSIAAAA CASIALCIAV PAAAHGAGET VTPNFQHAIP NIPGKSLTAV VVDYAPGAAS
PAHRHAGSAF IYAYVVSGDI ESQVNDGPKR VYHAGESFFE EPGAVHRVSR NASESRPARL
LAVFVADSND TVLTTPAK
|
|---|
| |