| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6080 |
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| Symbol | |
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| ID | 6182031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 666831 |
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| End bp | 667589 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689210 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001816069 |
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| Protein GI | 172065357 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.952753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAC GGAAAAAAAT CGCGGCAGTG ACGGGCGCCG GCACGGGAAT CGGCCACGCA
GCGGCCGTCG CGTTGGCGCG AGCCGGATTC GGCGTGGCAC TGCTCGGCAG GCGCATCGAG
CCGCTGCTCG CGACGAAGGA GATCATCGAG CAGGCCGGCG GGTTGGCCGC GGCAATTCCG
ACCGACGTCG CCGACGAGGC GTCGGTGGAC GAAAGCTTCA CGCGGATCGA CCGCGAGTTC
GGGCATCTCG ACGTGCTGTT CAACAACGCC GGCCGCAACG CCGGCGCCGT GCCGCTCGAC
GACTACTCAC TCGAATTCTG GAACGACGTG GTCGCGACCA ACCTGACCGG CGTGTTCCTG
TGCGCACGCG CCGCGTGGCG CCAGATGAAG CGCCAGACTC CGCAAGGCGG CCGCATCATC
AACAACGGTT CGATCTCGGC GCACGCGCCG CGCCCGAACA CGATCGCGTA CACGGCCACC
AAGCATGCCG TCCTCGGCAT CACCCGCTCG CTCGCGCTCG ACGGCCGGCC GTTCAACATC
GCATGCGGCC AGATCGACAT CGGCAACGCC GCCACGTCGC TGACCGAGCG CATGAACAGC
GGCGTGCAGC AGGCCGACGG CCGCATCGCA CCGGAGCCGC GCGTCGACGT CGCGCACGTC
GCGGACGCCA TCGTGCAGAT GGCGAACCTG CCGCTGGAAG CCAACATTCT GAACATGACG
ATCATGGCAA GCGCGATGCC CTACGTCGGG CGCGGCTGA
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| Protein sequence | MQARKKIAAV TGAGTGIGHA AAVALARAGF GVALLGRRIE PLLATKEIIE QAGGLAAAIP
TDVADEASVD ESFTRIDREF GHLDVLFNNA GRNAGAVPLD DYSLEFWNDV VATNLTGVFL
CARAAWRQMK RQTPQGGRII NNGSISAHAP RPNTIAYTAT KHAVLGITRS LALDGRPFNI
ACGQIDIGNA ATSLTERMNS GVQQADGRIA PEPRVDVAHV ADAIVQMANL PLEANILNMT
IMASAMPYVG RG
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