| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6076 |
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| Symbol | |
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| ID | 6182027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 660986 |
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| End bp | 663187 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689206 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001816065 |
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| Protein GI | 172065353 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCCG CCGCTACGCA AGCCGCTGCC GCGGCCGGAG AGCCGTGCGC CGCGCACGGC
TGGAATCTGC CGCACGGATC GGGTATCGAA GACGATCCGT TGCTCGGCTG CCTGCTCGTG
CTGACGCGGC TGTTCGACCG GCCGGTGGGC GTCGACACGC TCGTGGCCGG CCTGCCGCTC
GCCGGCCGGC GCCTCACGCC GGCCCTCTTC GTGCGAGCCG CGGCGCGCGC CGGCCTGTCG
GCCAAACTGG CCCGGCGCGC GCTGCCCGAC ATCCCGGATG CGGTCCTGCC CGCGGTGCTG
CTGCTCAACG ACGGCCAGGC CTGCGTGCTG GTTCGCCGCA ACGCGTGCGG CACCATGCAG
GTGATCCTTC CTGAAACAGG CATCGGCGAG GAAGCCGTCG ACGCGGCCGA ACTCGCGCAA
CGCCACGCCG GCCACGTGCT GTTCGCGCGC CCGGCCCACC GGTTCGATGC ACGCGACACG
GAAAGCGTCG TGCCGCGCCC GCGCCACTGG TTCTGGGGCG TGGTCGCGCA ATCGTGGCCG
ATCTATGCGG AAGTGATGCT CGCGTCGACG CTGGTCAATC TTTTCGCGCT GGCGATGCCG
CTGTTCACGA TGAACGTCTA CGACCGCGTC GTGCCGAACC GGGCGCTCGA GACGCTGTGG
GCGCTGGCGG CCGGCATCGC GCTCGTGATC GTGTTCGACG TCGTGATGCG CACGTTGCGC
GGCTATTTCA TCGACGTGGC CGGCAAGAAG ATCGACGTGA TCCTGTCGGC AAATCTCTAC
GAGAAAGTAC TCGGCATCCG GATGGCGGCA CGGCCGCCGT CCGTCGGCGG ATTCGCTTCG
CAGATCCAGG AATTCGAAGC CGTGCGCGAA TTCCTCACGT CGGCGACCGC GGCGGCGCTG
ATCGACCTGC CGTTTTCGAT CGTGTTCGTC GTTGCGATGT TCTGGGTCGG CGGCGGGCTC
GGCTGGCTGC CGCTGCTGGC GTTGCCGCTC GTGATCGGCG CGGGCGTGGC CGTGCAGGGG
CCGCTCGCGC GGGCCGTGCA AGCCAGCCAG CGTCACGCAA GCCAGCGCCA GGCCCTGCTG
ATCGAAACGC TGGTCGGCCT CGAGACGATC AAGGTCAACG GCGCGGAAGG ACCGATGCAG
GCGCGCTGGG AGCAGATGCT CGGCGAGATC GCACGGCTCG GGCTCAGGTC GCGCCTGCTG
TCGGGTTGCG CGGTCAATTT CGCGATGTTC GCGCAGCAGG CGGCCTATCT CGCGGTGGTC
CTGTGTGGCG TGTACATGAT CGGCGACGAC CGGCTCACGA CCGGCGGTCT GATCGCCTGC
ACGATCTTCA CCGGCCGCGC GCTCGCGCCG ATGGGCCAGG TCGCGTCGCT ACTGACCCGC
TACCACCAGT CGCGCAGCGC GCTGGCGTCG ATCGACGGCG TGATGAACCT GCCCGGCGAG
CGTCCGGCCG AGCAGCGCTT CGTCCATCGC CCCGCACTCG CCGGCGAGAT CGAATTCCGC
GACGTCGGCT TCGCGTATCC CGGCCAGAGC GGCGTCTCGC TCGAAGGCGT GTCGTTCCGC
ATCGCCGCGG GCGAGCGCGT CGGCATCATC GGGCGCGTCG GCTCGGGCAA GACCACGATC
GAGAAACTCG TCCTCGGTCT CTACCCGCCT TCGTCCGGCA ACGTGCTGAT CGACGGCGTC
GAACTGCGTC AATACGATCC TGCCGCGCTG CGGCGCGGGA TCGGTCACGT GCCGCAGGAC
GTGATGCTGT TCAACGGCAC CGTGCGCGAC AACATCGTGC TGGGCGCGCC GGGCGCGGAC
GACGACGCCG TGTTGCGCGC CGCGCAGGTG TCCGGCGTCG CGGACTTCGT CAACCGGGTG
CCGAACGGCT TCGACCTCGC GGTGGGCGAG CGCGGCGAAG CATTGTCCGG CGGGCAGCGC
CAGGCCATCG CCATCGCCCG CGCGATGCTG CTGTCGCCGC CGGTGCTGTT GCTCGACGAG
CCCAGCAGCG CGATGGACAA CCGCTCCGAA GAGCTGTTCA AGGCACGCCT GTCGGCCCAG
CTCGCCGGCC GCACGCTGCT GCTGGTCACG CACCGTCCGT CGCTGCTCAC GCTCGTCGAC
CGCCTGATCG TGATGGATCA GGGCCGCGTC GTCGCTGACG GCCCGAAGGA CCAGGTCCTC
GCGGCTCTTG CAGGGAGAAA GCTCCATGTC GCTGCTGGCT GA
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| Protein sequence | MQAAATQAAA AAGEPCAAHG WNLPHGSGIE DDPLLGCLLV LTRLFDRPVG VDTLVAGLPL
AGRRLTPALF VRAAARAGLS AKLARRALPD IPDAVLPAVL LLNDGQACVL VRRNACGTMQ
VILPETGIGE EAVDAAELAQ RHAGHVLFAR PAHRFDARDT ESVVPRPRHW FWGVVAQSWP
IYAEVMLAST LVNLFALAMP LFTMNVYDRV VPNRALETLW ALAAGIALVI VFDVVMRTLR
GYFIDVAGKK IDVILSANLY EKVLGIRMAA RPPSVGGFAS QIQEFEAVRE FLTSATAAAL
IDLPFSIVFV VAMFWVGGGL GWLPLLALPL VIGAGVAVQG PLARAVQASQ RHASQRQALL
IETLVGLETI KVNGAEGPMQ ARWEQMLGEI ARLGLRSRLL SGCAVNFAMF AQQAAYLAVV
LCGVYMIGDD RLTTGGLIAC TIFTGRALAP MGQVASLLTR YHQSRSALAS IDGVMNLPGE
RPAEQRFVHR PALAGEIEFR DVGFAYPGQS GVSLEGVSFR IAAGERVGII GRVGSGKTTI
EKLVLGLYPP SSGNVLIDGV ELRQYDPAAL RRGIGHVPQD VMLFNGTVRD NIVLGAPGAD
DDAVLRAAQV SGVADFVNRV PNGFDLAVGE RGEALSGGQR QAIAIARAML LSPPVLLLDE
PSSAMDNRSE ELFKARLSAQ LAGRTLLLVT HRPSLLTLVD RLIVMDQGRV VADGPKDQVL
AALAGRKLHV AAG
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