| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6070 |
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| Symbol | |
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| ID | 6182021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 639300 |
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| End bp | 641489 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689200 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001816059 |
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| Protein GI | 172065347 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACGG CAACAGGTTC GGTGCGACGC GCAATCGCGA TCGCGGCCGG GGGAACGTTG
TGCGCGGCGG CCGCGGGCGG CGCGCACGCG CAGGCATCGA ACGCGGCGGT AATGCCGCCG
GCCGATGCGG CGGCGCTGCT GCCGAAGATC GACGTGACGG GCGAGGCCGG CCGCGCGTCG
CTCGGGCTCG TCGGGTTGCG TACCGCCACC GCGACGAGGA CCGACACGCC GGTCGCCGAA
ATCCCGCAGA CGACCAACGT CGTGACCGCG CAGCAGATCG AGATGACCGG CGCGACCGAC
CTGAACCAGG CGCTGCGCTA CGTGCCGGGC TTCGCGACGT TCGGCTCCGA TACGCGAACC
GACTGGTATG CGGCGCTGCG CGGCTTCACG CCGACGCTGT ATGTCGACGG CGTGGCGGCG
CCGAACACGG CGGTCATTGC GAACTGGCGC GTCGATCCTT ACACGATCGA CTCGATCGCC
GTGCTGCGCG GGCCAACGTC GGTACTGTAC GGCGCGGGCG AGCCGGGCGC GATTGTCGAC
GCACATACGA AGCTGGCCGA CGGCGAGCGC GTGCGCGAAG CCGGCGTGCA GATCGGCAAC
GATGCGCGCA AGCAGACGAT GCTCGACATC GGCGACAAAC TGGATCCGGA CGGCCGATAT
GCGTACCGCT TCGTCGGCAT CGCGCGCGAC GGCAATGCGG AGACCGGCCC GAACGCCGAC
CGGCGCGTAG CCGTGGCGCC GTCGTTCCGC TGGCGGCCGA CCGCCGACAC GTCGCTGACG
GTGTCCGCTT CGTTCCTGCA GGATCACGGC GACATTTCGT CGAACTTCCT CCCGGCGTCG
GGCACGGTCT TGCCGAATCG GAACGGGCGC CTGTCGCAGG ACATCTACAT GGGCGACCCG
ACGTTCAACG ACTACCGGAA GAAACAATGG TCGCTCGGCT ATGCGCTCGA GCATCGCGTG
AACCCGATCT GGACGCTGCA ACAGGACGTG CGCTGGTCGC GCCTGTCGCT CGACGACGCG
ACGGTGTTCG GCAACGGCTT CATGCCCGGC AGCACGACGA ACATGATGCG GTTCGCCGGC
CTGTTCCAGT TGAACTACAG CCGGCTCGAC ATCGACAATC GCGCGCAGGC GCGCTTCGCC
ACCGGCCCGC TCGAGCACAC GCTGCTGCTC GGCCTGCAGT TCGACCGGCA GACGACGACC
AACAGCGTAT GGCTCGCGCT CGCGCCGTCG CTCAACCTGT ACCACCCCGT CTATCGTCCG
GTGACGGCCG CGATCTTTTC CGGCCGCACG TCGCTCGGGC ACGTCGATCA GTACACGGCG
ATGAATTCGC TCGGCGCGTA TGCGCAGGAC CAGATCCGCT GGAACCGCTG GACGCTGACG
CTCGGCGGCC GTGAAGATCG CGTGAACGCA CGCTTCGACG ACCGGGCGGC CGGCATCGGC
ACGCAGCAGG ACGTCAGTGC GTTTTCGGGC CGCGTCGGGC TCACCTATCA GGGCGATGCG
GGATGGTCGC CTTACGTGAG CTATTCGACG TCGTTCGATC CGGTGATCGG CGTGCGGATG
TATGGCGGCG GCCTGCCGAA ACCGACGCGC GGCAAGCAGA CCGAAGCCGG GCTGCGCTGG
CAGCCGGCTG GCCGGAACCT GATGCTCACC GCGGCCGTTT ATCGGATCGA CCAGACCAAC
GTCGTGACGC CGTCGCCGAC GAATCTCGAC CCCACCGGCA CGTCGTCCGT GCAGACCGGC
AAGGTGCGTT CGCGCGGGAT CGAACTGAGC GCGGTCGGGA ACGTGACGCG CGAGCTGTCG
ATCGTCGCGT CGTACGTCTA TCAGGACGTC AAGAACGTGC AGGCGAACGA TGCATCGCTG
AACAACTGGC CGGTGTCCGT GCCGCTGCCG CGGCAGATGG CGTCGCTGTG GACGGACTGG
ACCTGGCACA CCGGCGCGCT GTCGGGCCTC GGAGTCGGCG CCGGCGTGCG CTACCAGAGT
GCGTCGGCCG GCGCGCCCGA CAATTCGCTG ACGGTGCCGA GCGCCACGCT GTACGATCTC
GCGATGCACT ACGAGGTGCG TCACTGGCGG TTCGCGCTGA ATGTCGCGAA TGTGTTCGAC
CGCCGCTACG TGAGCGGCTG CCAGTCTTAC GCGGTGTGCG TGTTCGGCAA CGAGCGCACG
GTGCTGGCCA GCGCGAAATA CAACTGGTAG
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| Protein sequence | MGTATGSVRR AIAIAAGGTL CAAAAGGAHA QASNAAVMPP ADAAALLPKI DVTGEAGRAS
LGLVGLRTAT ATRTDTPVAE IPQTTNVVTA QQIEMTGATD LNQALRYVPG FATFGSDTRT
DWYAALRGFT PTLYVDGVAA PNTAVIANWR VDPYTIDSIA VLRGPTSVLY GAGEPGAIVD
AHTKLADGER VREAGVQIGN DARKQTMLDI GDKLDPDGRY AYRFVGIARD GNAETGPNAD
RRVAVAPSFR WRPTADTSLT VSASFLQDHG DISSNFLPAS GTVLPNRNGR LSQDIYMGDP
TFNDYRKKQW SLGYALEHRV NPIWTLQQDV RWSRLSLDDA TVFGNGFMPG STTNMMRFAG
LFQLNYSRLD IDNRAQARFA TGPLEHTLLL GLQFDRQTTT NSVWLALAPS LNLYHPVYRP
VTAAIFSGRT SLGHVDQYTA MNSLGAYAQD QIRWNRWTLT LGGREDRVNA RFDDRAAGIG
TQQDVSAFSG RVGLTYQGDA GWSPYVSYST SFDPVIGVRM YGGGLPKPTR GKQTEAGLRW
QPAGRNLMLT AAVYRIDQTN VVTPSPTNLD PTGTSSVQTG KVRSRGIELS AVGNVTRELS
IVASYVYQDV KNVQANDASL NNWPVSVPLP RQMASLWTDW TWHTGALSGL GVGAGVRYQS
ASAGAPDNSL TVPSATLYDL AMHYEVRHWR FALNVANVFD RRYVSGCQSY AVCVFGNERT
VLASAKYNW
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