| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6069 |
|---|
| Symbol | |
|---|
| ID | 6182020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 636373 |
|---|
| End bp | 638592 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641689199 |
|---|
| Product | LamG domain-containing protein |
|---|
| Protein accession | YP_001816058 |
|---|
| Protein GI | 172065346 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACA CCCCTCTCCT GCTTGAATCG AACGCGCGCG TTTCCCGGCG CACCTTCCTT
TACAGCGTCG GAGCGCTCGC GCTGTCGGCA TGCAACGGCT CCGGCGCAAG CGAGAACGTG
CGCGGCGTCA CGACCGCGGC AGCGGCGGGC GGCAACCGTG CGCTCGCACG CGTGGCGACG
GGCACGGCCG CCGTCACGAC CCGCACGGCG TTCGTCCATC CTGGGTTGCT GCACACGCAA
GCCGATTTCG ACCGGATCGC GCAGAAGGTC GCGACCGCCG CGTCGCCGTG GCGCGAAGGC
TGGAACACAC TGATTGCAAA CAGCCATGCG CAGCTGACGT GGTCGCCGCG CCCGCAGGCC
GTCGTCACGC GCGGCGGCAC CGGCGCGCAA AACTATCCGG TGCTGTACAA GGACATCGCG
GCCGCCTATG CGTGCGCGCT GCGCTGGAAG GTGTCGGGCA ACAAAGCGTA TGCGGACAAG
GCCGTGCAGA TCATGAACGA ATGGTCGTCG ACGCTGCAGA ACCTCGCGGG CGACTCGAAC
GTCGACCTGG CCGCCGGCCT CTACGGGTAC GAATTCGCGA ACGCCGGCGA AATCATGCGC
ACGTATTCCG GCTGGGCCGC GGCCGACTTC GCCGCGTTCC GCGCGATGAT GGCCGACAAG
TTCTACCCGA TCAACGCCGA CTTCCTGAAT CGCCACAACA ACACCGACAT CACGCACTAC
TGGGCGAACT GGGATCTGTG CAACATCGCG TCGATCATGG CGATCGGCGT GCTGTGCGAC
GACCACGCGA AGTTCGACGA AGCCGTCAAC TATTTCATCG ACGGCGCGGG CAACGGCGCG
ATCGCGCAGG CCGTCTATTA CCTGCATCCC GGCCACCTGG GCCAATGGCA GGAATCGGGC
CGCGACCAGG GGCACAACAC GCTCGGCATC GCGCTCGCCG GCGCGATCTG CGAAATGGCG
TGGAACCAGG GCATCGACCT GTACGGCCAC GACAACAACC GCTTCCTCGC GGGCGCCGAA
TACGTTGCAA AAGCGAATCT CGTGCAGCCG GACGGCACGT TTCCGACGGT GCCGTATGCG
CGCTACGCCA ACGTCGACGT CACGCAAGCG CAATTCTCGA CCGGCAGCCA AGGCGCGATT
CGTCCGTGCT GGGCGCTCGT CTACAACCAT TACGTGAACC GCAGGGGGCT CGCCGCACCG
TGGTCCGGGA AGTTCGCGCG CGCGATCCAG CCCGAAGGCG GCGGCGGCAA CTACGGCGAA
ACGAGCGGCG GCTACGACCA GCTCGGCTAC GGCACGCTGA CCTGCACGCG CGATCCCGTT
GCGCCCGCAA CCGCACCGAG CGGGCTGACC GCGTGGCCGG CCGCCGGGCA CGTCGTGCTG
TCGTGGTGGG GCATCGCGAA CGCGGCCAGC TACGACGTGA AGCGTGCCGC CACCGCGGGC
GGTCCGTATA CGACCATCGC GACCGGCATC GTCGATCCGT TGACGTATAC CGACCACCCG
GCCGCGGGCG TCTGGTACTA CGCGATCAGC GCGCGCACCG TATCGGGCGA ATCCGCGAAT
TCCGCGGAAA TGGCCGCATC GACGGCCCTG CAACTGCATA CGCTTCTGAC GTTCGACGAG
ACAGGCGGCA CGAGTGCGGC GGACGCGAGC GGCAACGCTC ATGCGGGCAC GCTCGTCGGC
GGCGCATCGC GCGGGGCCGG CAAAACGGGC AATGCGGTGT CGCTCGACGG CTCGACCGGC
TACGTCGCGT TGCCGAACGA CATCGTCGCG GACGTGTCGG ATTTCACGAT CGCGGCGTGG
GTCAACTGGC GCGGCGGCCA GACGTGGGCG CGCATCTTCG ATTTCGGTTC GGGCACCGGC
CGCTATCTGT TCGTCACGCC GAAGAGCCAC GGCGGCACGA TGCGCTTCGC GATCACCACC
AATGGCGGGC ATGGCGAGCG CACGATCGAC GGCAACGCGG CCCTGCCGGC AGGGCAATGG
GCACACGTCG CCGTCACGCT GGCGGCCGAC ACCGCGACGC TCTATCTGAA CGGCAATGCG
ATCGGCTCGG CGAACGACGT GATCTTCGCG CCGTGGCGCA TCGGGAAAAC CGCGCAGAAC
TGGATCGGAC GTTCGCAATA CCCGGGCGAT CCGTTCTTCA ACGGGTTGAT CGACGAATTC
CGCATCTATC GCGGTGCAAT GTCGGCCGAA CAGGTGAAGG CGCTCGCGCA GGGAGCGTGA
|
|---|
| Protein sequence | MHDTPLLLES NARVSRRTFL YSVGALALSA CNGSGASENV RGVTTAAAAG GNRALARVAT
GTAAVTTRTA FVHPGLLHTQ ADFDRIAQKV ATAASPWREG WNTLIANSHA QLTWSPRPQA
VVTRGGTGAQ NYPVLYKDIA AAYACALRWK VSGNKAYADK AVQIMNEWSS TLQNLAGDSN
VDLAAGLYGY EFANAGEIMR TYSGWAAADF AAFRAMMADK FYPINADFLN RHNNTDITHY
WANWDLCNIA SIMAIGVLCD DHAKFDEAVN YFIDGAGNGA IAQAVYYLHP GHLGQWQESG
RDQGHNTLGI ALAGAICEMA WNQGIDLYGH DNNRFLAGAE YVAKANLVQP DGTFPTVPYA
RYANVDVTQA QFSTGSQGAI RPCWALVYNH YVNRRGLAAP WSGKFARAIQ PEGGGGNYGE
TSGGYDQLGY GTLTCTRDPV APATAPSGLT AWPAAGHVVL SWWGIANAAS YDVKRAATAG
GPYTTIATGI VDPLTYTDHP AAGVWYYAIS ARTVSGESAN SAEMAASTAL QLHTLLTFDE
TGGTSAADAS GNAHAGTLVG GASRGAGKTG NAVSLDGSTG YVALPNDIVA DVSDFTIAAW
VNWRGGQTWA RIFDFGSGTG RYLFVTPKSH GGTMRFAITT NGGHGERTID GNAALPAGQW
AHVAVTLAAD TATLYLNGNA IGSANDVIFA PWRIGKTAQN WIGRSQYPGD PFFNGLIDEF
RIYRGAMSAE QVKALAQGA
|
|---|
| |