Gene BamMC406_6062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6062 
Symbol 
ID6182081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp628530 
End bp628985 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content71% 
IMG OID641689192 
ProductAraC family transcriptional regulator 
Protein accessionYP_001816051 
Protein GI172065339 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTTC CGTTCCACGA TCCGATCGAC GGCGCGATTC CCCGCGCGCC GCGTGTCGCG 
CGGCCCGTCT CGCCGGCGAT CGGCGACGTG CTGCGCACGA TCGACGCGTC GTTCGCGCAG
CCGCTGAACC TCGACACGCT CGCGGCGGTG GCCGGGTTGA GCGTGTCGCG TTTCACCGCG
CGCTTTCGCA GCGAAACCGG GCTGTCGCCG CACCGGTATC TGTGTCTCGT GCGGATACGG
CGGGCGCAGG ACCTGTTGCG CGCCGGTCTC GCGCCGTCGG TCGTCGCGAC CGACGTCGGC
TTCTTCGATC AGAGCCATCT GTGCCGGCAT TTCCGGCGCG TGCTCGGGAT CACGCCGCGC
GATTACGTGG TCGCCCGCAC GGGCGGCGCG CCGGCGCGAG CGCCATCGAC GCGCATGCGC
AGCGAACGCC GCGATGCGTC GTGTCACGCG GCGTAA
 
Protein sequence
MAVPFHDPID GAIPRAPRVA RPVSPAIGDV LRTIDASFAQ PLNLDTLAAV AGLSVSRFTA 
RFRSETGLSP HRYLCLVRIR RAQDLLRAGL APSVVATDVG FFDQSHLCRH FRRVLGITPR
DYVVARTGGA PARAPSTRMR SERRDASCHA A