| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6058 |
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| Symbol | |
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| ID | 6182077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 623165 |
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| End bp | 624118 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689188 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001816047 |
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| Protein GI | 172065335 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.11732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAA TTCTCATCGG CCTGATCGGC CGGCGCATCG CGGTCACCGC GCTGACGCTG
CTGATCGTAT CCGCGATCAT CTTCACGATC ACGAACCTGC TGCCGGGCGA CGCCGCGCAG
GCCGCGCTCG GCCAGTCGGC GACGCCGGAG ACGGTCGCCG CGCTGCGCCA GCAGTTCGGT
CTCGACATGC CGGCGCACGT GCGTTACCTG CACTGGCTCG GCGGGCTGCT GCACGGCGAC
TTCGGCCGGT CGTTTTCGGG CGACATGCCA GTGTCGGAGC TGATCGGTGG GCGCCTGCCG
AAGTCGCTCA CGCTGGCGGC GATCACGACC GCGGTGTCGG TGCCGATCGC ATTGCTGCTC
GGGATCCTCG CGGCGGTCAA GCGCGAGTCG GCGATCGACC GCGTGATCAG CCTCGGCACG
CTGTCGCTCG TCGCGACGCC GGAATTCCTG ATCGCGACGG TCGCCGTGCT CGTGTTCGCG
GTGAAGCTGC ACTGGCTGTC CGCGCTGTCG TACAGCGGCC CGATCGAAAG CCTGCACGAT
TTCCTGCGTG CGTATGCGAT GCCGGTGCTG ACGCTGTGCG CGGTCGTGAT CGCGCAGATG
GCACGGATGA CGCGCGCCGC GGTGATCGAG CAACTCAGCG CGTCGTATGT CGAGATGGCC
GTGTTGAAGG GCGCGAGCCC CGCGCGCGTC GTGCTGCGCC ATGCGTTGCC GAACGCGATC
GGCCCGATCG CCAATGCGAT CGCGTTGAGC CTGTCGTATC TGCTCGGCGG CGTGATCGTC
GTCGAGACGA TCTTCAACTA TCCGGGCCTC GCGAGCCTGA TGGTCGACGC CGTCAGCAAC
CGCGATTTCC CGTTGGTTCA AGCCTGCACG CTGATCTTCT GCGTCGCTTA CCTGACGCTG
GTGCTGTTCG CCGACCTGTG CTCGATCGTG TCGAACCCGC GACTGCGCAC CTGA
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| Protein sequence | MNRILIGLIG RRIAVTALTL LIVSAIIFTI TNLLPGDAAQ AALGQSATPE TVAALRQQFG
LDMPAHVRYL HWLGGLLHGD FGRSFSGDMP VSELIGGRLP KSLTLAAITT AVSVPIALLL
GILAAVKRES AIDRVISLGT LSLVATPEFL IATVAVLVFA VKLHWLSALS YSGPIESLHD
FLRAYAMPVL TLCAVVIAQM ARMTRAAVIE QLSASYVEMA VLKGASPARV VLRHALPNAI
GPIANAIALS LSYLLGGVIV VETIFNYPGL ASLMVDAVSN RDFPLVQACT LIFCVAYLTL
VLFADLCSIV SNPRLRT
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