| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6053 |
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| Symbol | |
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| ID | 6182072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 616150 |
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| End bp | 617076 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641689183 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001816042 |
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| Protein GI | 172065330 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCC TGTACAAAGC CGACCCGGTG CGCGGCGCGC AATGGGCACA ACGCTTCGCG
CAACGCGCGC CCGAGCTCCC ATTCCGGATC TGGCCGGATC TCGGCGATCC GCACGACGTG
CGCTACCTCG CCGCGTGGCA ACCGCCGGAC GACCCGGTCG CGCTGCTGCC CAACCTCGAG
GTCGTGTTCT CGGTCGGCGC CGGCATCGAT CAGTTCGACC TGTCGCGCGT GCCCGCACAC
ATTCCGGTCG TGCGGATGAT CGAGCCGGGC ATCGTCGAAG GGATGGTCGA ATACGTGACG
CAGGCCGTGC TGACGATCCA CCGCGACCTG TTCGACTACG CGGCGCAACA GCGCGTCCAG
ACATGGTGCG AGAAGCCGGT GCGCGCGGCC GCGTCGCGGC GCGTCGGCGT GCTCGGGCTC
GGCACGCTCG GGCAGGCCGT GCTCGACACG CTGCGGCGCT TCGGTTTCCC GTGCGCGGGC
TGGAGCCGCA CGCCGCGCAC GCTCGACGGC ATCGACTGCT ACGCGGGCGA CGCAGCGCTC
GACGCGTTCC TGGCCCGCAC CGACATCCTG ATCTGCCTGC TGCCGCTCAC CGACAGCACG
CGCGGCCTGC TCGGCGCTCG CGTGTTCGAC GCGCTGCCGG CCGGCGCATC GCTCGTGCAG
GTCGGGCGCG GCCCGCAGCT CGATGCGGCC GCGCTGCTCG CCGCGCTCGA CAGCGGCCGG
CTCGACAGCG CGATCCTCGA CGTGACGGAG CCCGAACCGC TGCCGGCCGG CCACCCGTTC
TGGACGCATC CGCGCATTCG CATCACGCCA CACATCGCGA GCGCGACGCG GCCCGACACC
GCGGTCGACG CGGTGCTGGA GAACCTCGCG CGCCATCGCG CGGGCCAGCC GATGATCGGC
ATCGTCGATC GCGCGCGCGG CTACTGA
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| Protein sequence | MSFLYKADPV RGAQWAQRFA QRAPELPFRI WPDLGDPHDV RYLAAWQPPD DPVALLPNLE
VVFSVGAGID QFDLSRVPAH IPVVRMIEPG IVEGMVEYVT QAVLTIHRDL FDYAAQQRVQ
TWCEKPVRAA ASRRVGVLGL GTLGQAVLDT LRRFGFPCAG WSRTPRTLDG IDCYAGDAAL
DAFLARTDIL ICLLPLTDST RGLLGARVFD ALPAGASLVQ VGRGPQLDAA ALLAALDSGR
LDSAILDVTE PEPLPAGHPF WTHPRIRITP HIASATRPDT AVDAVLENLA RHRAGQPMIG
IVDRARGY
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