| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6051 |
|---|
| Symbol | |
|---|
| ID | 6182070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 614588 |
|---|
| End bp | 615988 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641689181 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001816040 |
|---|
| Protein GI | 172065328 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAG CCGCGCTGAT CGAAGCCGAT CGTCAACACC TGATCCACCC CGTCGTCAAC
TATCGCGCGC ACGAGGCGCG CGGCGTCACC GTGCTCGAAT CCGCTAACGG CGTGTTCCTG
CGCGACGCCG ACGGCCATAC ATTGCTCGAT GCGTTCTCGG GCCTGTGGTG CGTGAACGTC
GGCTACGGCC GCGACAGCAT CGTGAAGGCC GCCGCCGAGC AGATGACGAA GCTGCCCTAC
GCGACCGGCT ATTTCCATTT CGGCTCGCAG CCCGCGATCG AGCTCGCCGA ACGGCTCGCG
GCGCTCGCGC CGCCGTCGCT GAATCGCGTG TACTTCACGC TCGGCGGCTC GGATGCGGTC
GATTCCGCGG TGCGCTTCAT CACGCACTAT TTCAACGCGA CCGGCCGCCC GTCGAAGAAG
CAGATGATCG CGCTCGAGCG CGGCTATCAC GGTTCGTCGT CGATCGGCGC GGGGCTCACC
GCGCTGCCCG CGTTCCACCG CCATTTCGAC CTGCCGCGCG CGGACCAGCA CCATATTCCG
TCGCCCTACC CGTATCGCCA CCCGCTCGGC GACGATCCGC AGGCGCTGAT CGCCGCGTCG
GTCGCCGCGC TCGAAGCGAA GGTCGCGGAA CTCGGCGCGG ACAATGTCGC CGCGTTCTTC
TGCGAACCCG TGCAAGGCTC CGGCGGTGTG ATCGTGCCGC CGGCCGGCTG GCTGAAGGCG
ATGCGCGACG CCTGCCGGCG CCTCGGCATC CTGTTCGTCG CCGACGAGGT GATCACCGGC
TTCGGCCGCA CGGGCCCGCT GTTCGCATGC GAGGCCGAGC AGGTCGATCC GGACCTGATG
ACCGTCGCGA AGGGCTTGAC CGCCGGCTAT GCGCCAATGG GCGCGGTGCT GATGTCCGAC
GAAATCTACG AAGGCCTCGC GGGCAGCCGC GCGGAGTCGG CCGTGGTCGG TCACGGGCAT
ACGTATTCCG CGCACCCGGT CAGCGCGGCG ATCGGCCTCG AGGTGCTCAA GCTCTATCAC
GAAGGCGGGC TGCTCGCGAA CGGCCAGGCG ATGGCGCCGC GCTTCGCGGC GGGGCTCGAT
GCGCTGCGCG CGCATCCGCT CGTCGGCGAT GCGCGCTCGG TCGGCCTGCT CGGCGCGCTC
GAACTGGTGT CCGACAAGGC GCGCAAGACG CGCTTCGACC CGGCGCTGAA CGTGCCCGAC
CGGATCGCGG CGGCCGCTTA CGCGAACGGC GTGGTGTTTC GCGCATTCGG CGACGGCGTG
CTCGGCTTCG CGCCGGCGCT GAGCTTCACG GCGGGCGAGT TCGACCTGCT GTTCGAACGC
GTGCGCAAGA CGCTCGACGA CGTGCTGGCC GACCCGGGCG TGCAGCGCGC GCTGGACGCC
GCGCACGCGC AGCCGGCCTG A
|
|---|
| Protein sequence | MNQAALIEAD RQHLIHPVVN YRAHEARGVT VLESANGVFL RDADGHTLLD AFSGLWCVNV
GYGRDSIVKA AAEQMTKLPY ATGYFHFGSQ PAIELAERLA ALAPPSLNRV YFTLGGSDAV
DSAVRFITHY FNATGRPSKK QMIALERGYH GSSSIGAGLT ALPAFHRHFD LPRADQHHIP
SPYPYRHPLG DDPQALIAAS VAALEAKVAE LGADNVAAFF CEPVQGSGGV IVPPAGWLKA
MRDACRRLGI LFVADEVITG FGRTGPLFAC EAEQVDPDLM TVAKGLTAGY APMGAVLMSD
EIYEGLAGSR AESAVVGHGH TYSAHPVSAA IGLEVLKLYH EGGLLANGQA MAPRFAAGLD
ALRAHPLVGD ARSVGLLGAL ELVSDKARKT RFDPALNVPD RIAAAAYANG VVFRAFGDGV
LGFAPALSFT AGEFDLLFER VRKTLDDVLA DPGVQRALDA AHAQPA
|
|---|
| |