| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6035 |
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| Symbol | |
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| ID | 6181852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 595365 |
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| End bp | 596924 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689165 |
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| Product | xylose transporter ATP-binding subunit |
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| Protein accession | YP_001816024 |
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| Protein GI | 172065312 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0730737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.8225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CCTTGCTGAC GATGCGCGGC ATCGTCAAGG CATTCGACGG CGTGAAGGCG
CTCGACGGAA TCGACCTGGC CGTGCGGCCT GGCGAGTGCG TCGGCCTGTG CGGCGAGAAC
GGCGCCGGCA AGTCGACGCT GATGAAGGTG CTGTCGGGCG TCTACCCGCA CGGCACGTGG
GACGGCGAGA TCCGCTGGGA AGGCGCGCCG CTCGTCGCGT CCGGCGTGCG CGACACCGAG
CGCGCGGGCA TCGTGATCAT TCACCAGGAG CTGATGCTCG TGCCCGAACT GTCGGTGGCC
GAGAACATCT TTCTCGGCAA CGAGATCACG CTGCCCGGCG GACGCATGCA CTACGCGGAG
ATGGTGCGCC GTTCGGAAGC GCTGCTGCGC GAGCTGCGGA TCGACGCGAT CAACGTCGCG
CAGCCGGTGA TGAACTACGG CGGCGGCCAC CAGCAGCTGA TCGAAATCGC GAAGGCGCTG
AACAAGCGCG CGAAGCTGCT GATCCTCGAC GAGCCGTCGT CGTCGCTGAG CGCCGCCGAG
ACGCGCATCC TGCTCGACAT CGTGCGCGAC CTGAAGCGTC GGGGTGTCGC GTGCGTGTAC
ATCTCGCACA AGCTCGACGA AGTCGATGCG GTATGCGACA CCGTGACCGT GATCCGCGAC
GGCCGCCATG TCGCGACCGA GCCGATGCGC GGGCTGACCA CCGACCGGAT CATCGCAATG
ATGGTCGGCC GCGAGATCCG CAACCTGTAT CCGCGCGAGC CACACGAGAT CGGCGACGTC
GTGCTGGAGG CGCGCAACGT GACCTGTCAC GACGTCGCGA ACCCGCGCCG CAAGCGCGTC
GACGACGTAT CGTTCAGCGT GCGGCGCGGC GAGATCCTCG GTGTCGCCGG GCTTGTCGGC
GCGGGCCGCA CCGAACTGAT GCAGGCGATC TTCGGCGCGT ATCCGGGCGC GAGCACGGCG
AGCGTGCGGA TGAACGGCCG GCCGCTCGCG ATCCGCGCGC CGGCCGATGC GATCCGCGCG
GGCATCGCGA TGGTGCCGGA GGATCGCAAG CGTCACGGGA TCGTGCCGCA GCTCGGCGTG
GGCCACAACA TCACGCTGTC GGTGCTGCGC CGTTTCGCGA CGCGCGGACG GATCGACGCA
GCCGCCGAGC TCGATGCGAT TCGCACGGAG ATGCAGCGGC TGTCGGTGCG CGCCGCGCAT
CCGTTCCTGC CGATCGCTAG CCTGTCCGGC GGCAACCAGC AGAAGGCGGT GCTCGCCAGG
ATGCTGCTGG CCGACCCGCA GGTGCTGATC CTCGACGAAC CGACCCGCGG CGTCGACGTC
GGCGCGAAGG CGGAGATCTA CCGGCTGATC TTTGCGCTCG CGAAACGCGG CGTCGCGCTG
ATCGTCGTGT CGTCGGAGTT GCCGGAAGTG CTCGGGCTCG CCGATCGCGT GCTCGTGATC
GGCGAAGGCG AGCTGCGCGG CGATTTCGTG AACGACGGCC TCACGCAGGA ACAGATCCTC
GGCGCCGCGC TGACGCCCGC GCGGCGTCCG GCCGAACCCA TTGCAGCGAG TACCCCATGA
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| Protein sequence | MTEPLLTMRG IVKAFDGVKA LDGIDLAVRP GECVGLCGEN GAGKSTLMKV LSGVYPHGTW
DGEIRWEGAP LVASGVRDTE RAGIVIIHQE LMLVPELSVA ENIFLGNEIT LPGGRMHYAE
MVRRSEALLR ELRIDAINVA QPVMNYGGGH QQLIEIAKAL NKRAKLLILD EPSSSLSAAE
TRILLDIVRD LKRRGVACVY ISHKLDEVDA VCDTVTVIRD GRHVATEPMR GLTTDRIIAM
MVGREIRNLY PREPHEIGDV VLEARNVTCH DVANPRRKRV DDVSFSVRRG EILGVAGLVG
AGRTELMQAI FGAYPGASTA SVRMNGRPLA IRAPADAIRA GIAMVPEDRK RHGIVPQLGV
GHNITLSVLR RFATRGRIDA AAELDAIRTE MQRLSVRAAH PFLPIASLSG GNQQKAVLAR
MLLADPQVLI LDEPTRGVDV GAKAEIYRLI FALAKRGVAL IVVSSELPEV LGLADRVLVI
GEGELRGDFV NDGLTQEQIL GAALTPARRP AEPIAASTP
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