| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6034 |
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| Symbol | |
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| ID | 6181851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 594265 |
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| End bp | 595293 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689164 |
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| Product | D-xylose ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_001816023 |
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| Protein GI | 172065311 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.715776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.5888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCG TGACGCGTCG TACCGTATTG AGTTCCCTTG CCGGCGCCGC CGCGCTGGCA
GTCCTCGCGC TGGGCGCACC GCTCGCGCAT GCGAGCAAGG ACAAGCCCGA GATCGGCTTC
TGCATCGACG ACCTGCGCGT CGAGCGCTGG TCGCGCGATC GCGATTATTT CGTCGCGGCC
GCGACGAAGC TCGGCGCGAA GGTGTCGGTG CAGTCGGCCG ACGCCAGCGA GGCGCGGCAG
ATTTCCCAGA TCGAGAACCT GATCTCGCGC GGCGTCGACG TGATCGTGAT CGTGCCGTTC
AATTCGAAGA CGCTCGGCAA CGTCGTCGCC GAAGCGAGGA AGGCCGGCAT CAAGGTCGTG
TCGTACGACC GCCTGATCCT CGATGCGGAT GTCGACGCGT ACATCTCGTT CGACAACGAG
AAGGTCGGCG AACTGCAGGC GCAGGGCGTG TTCGACGCGA AGCCGAAGGG CAATTACTTC
CTGCTCGGCG GCGCGCCGAC CGACAACAAC GCGAAGATGC TGCGCGAAGG ACAACTGAAG
GTGCTGAAGC CGGCGATCGA CCGCGGCGAC ATCAAGCTCG TCGGCCAGCA ATGGGTGCCC
GAGTGGAGCG CGTCGACCGC GCTGCGGATC GTCGAGGACG CGCTGACCGC GAACAACAAC
AAGATCGACG CGATCGTCGC GTCGAACGAC GGCACCGCCG GCGGCGCGAT CCAGGCGCTC
GCCGCGCAGC ATCTGGCCGG CAAGGTGCCG GTGTCCGGGC AGGATGCGGA TCTCGCGGCG
GTCAAGCGCG TGATCGCCGG TACGCAGACG ATGACGGTCT ACAAGCCGCT GAAGCTGATC
GCGAGCGAAG CCGCGAAGCT CGCGGTCGAT CTCGCGAAGG GCGCGAAGCC CGCGTTCAAC
GCGCAATACG ACAACGGGAA GAAGAAGGTC GACACGGTGC TGCTGCAGCC GACGCTGCTG
ACGAAGCGCA ACGTCGACGT GGTCGTGAAG GACGGCTTCT ACACCCAGGC CCAGCTGGCG
AGCCAGTAA
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| Protein sequence | MKSVTRRTVL SSLAGAAALA VLALGAPLAH ASKDKPEIGF CIDDLRVERW SRDRDYFVAA
ATKLGAKVSV QSADASEARQ ISQIENLISR GVDVIVIVPF NSKTLGNVVA EARKAGIKVV
SYDRLILDAD VDAYISFDNE KVGELQAQGV FDAKPKGNYF LLGGAPTDNN AKMLREGQLK
VLKPAIDRGD IKLVGQQWVP EWSASTALRI VEDALTANNN KIDAIVASND GTAGGAIQAL
AAQHLAGKVP VSGQDADLAA VKRVIAGTQT MTVYKPLKLI ASEAAKLAVD LAKGAKPAFN
AQYDNGKKKV DTVLLQPTLL TKRNVDVVVK DGFYTQAQLA SQ
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