Gene BamMC406_6031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6031 
Symbol 
ID6181848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp589943 
End bp591136 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content68% 
IMG OID641689161 
ProductAraC family transcriptional regulator 
Protein accessionYP_001816020 
Protein GI172065308 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators
[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCG CCCCTTCCGC CCAGACACCG CACCGCATCG CGCTGCTGTT CAACGCGAAC 
AAGGTCTACG ACCGCGAGAT CATCAGCGGC ATCGGCCTGT ATCTGCACAC GACGCGCGTC
GTGTGGGACC TGTTCCTCGA AGACGACTTC CGCTGCCGGC TCGCCGGCAT CGAGCGCTTC
GACGGCGACG GCATCATCGC GGACTTCGAC GACCCGGCCG TCGCCGACGC GCTCGCCGGT
TCGCCGCTGC CGATCGTCGC GGTCGGCTCG TCATACGAGG ATCCGACGCA GTATCCGGAC
GGCGTCCCAT ATATTGCGAC CGACAACCCC AAGCTCGTGT CGCTCGCCTA TACGCACCTG
ATCGGCGCGG GGCTCGCGCA TTTCGCGATG TACAGCCTTC CGGCCGCCCA GGAGAATCGC
TGGGCGCAGC AGCGCGAGCT CGCCTTCGAC CGGCTCGCGC GCGCGGACGG GCTCGACGCG
CCGATCTATC GCGGCGTGTC GACGAGCGCG TCGGGCTGGG ATCATGCGAT CGAGCAGCTG
ATCGGCTGGC TGCACGCGCT GCCGAAACCC GTCGGCGTGA TCGCGGTCAC CGATGCGCGC
GCGCGGCACC TGCTGCAGGC GTGCCTGATC GCCGGCATCG CGGTGCCGGA ACAAGTCGCG
ATCATCGGCA TCGACAACGA TCCGCTCACC CGCACGCTGA CGCGCATTCC ATTGTCGTCG
GTCATCCAGG GCACCGAGGA AATGGGCCGC ACCGCCGCGC ACTTGCTGCA CCGGATGCTG
CGCGGCGCGC GTTTTCCCGG GCAGCGCATC CTCGTGCCGC CGGTCGGCAT CAACGTGCTC
GAATCGACGC GCCACCAGCC GCTCGCGAGC CCGCACGTGA TGCGCGCACG GCATTTCATC
CGCCAGTACG CATGCCAGGG GATCAAGACC GAACAGGTCG CCGACTACGT CGGTGTGTCG
CGCTCGCTGC TCGAGGAACA CTTCCGGCGC GAGCTGCAGC GCACCGTTCA CCAGGAAATC
CTGCGTCACA AGCTCGAGGC CGCGCAGGCG CTGCTCGCGG CCCGCAATGC GTCGAGCGCG
GAAGTCGCGA TCCGCTGCGG CTTCACGTCG CTGCAATACA TGTATGCGGT GTTCCGCCGC
GAACTCGGCT GCACGCCGCG CGAATACCAG GAACGCACCG CGCCTGCCCA CTGA
 
Protein sequence
MNRAPSAQTP HRIALLFNAN KVYDREIISG IGLYLHTTRV VWDLFLEDDF RCRLAGIERF 
DGDGIIADFD DPAVADALAG SPLPIVAVGS SYEDPTQYPD GVPYIATDNP KLVSLAYTHL
IGAGLAHFAM YSLPAAQENR WAQQRELAFD RLARADGLDA PIYRGVSTSA SGWDHAIEQL
IGWLHALPKP VGVIAVTDAR ARHLLQACLI AGIAVPEQVA IIGIDNDPLT RTLTRIPLSS
VIQGTEEMGR TAAHLLHRML RGARFPGQRI LVPPVGINVL ESTRHQPLAS PHVMRARHFI
RQYACQGIKT EQVADYVGVS RSLLEEHFRR ELQRTVHQEI LRHKLEAAQA LLAARNASSA
EVAIRCGFTS LQYMYAVFRR ELGCTPREYQ ERTAPAH