Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6031 |
Symbol | |
ID | 6181848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 589943 |
End bp | 591136 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641689161 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001816020 |
Protein GI | 172065308 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCG CCCCTTCCGC CCAGACACCG CACCGCATCG CGCTGCTGTT CAACGCGAAC AAGGTCTACG ACCGCGAGAT CATCAGCGGC ATCGGCCTGT ATCTGCACAC GACGCGCGTC GTGTGGGACC TGTTCCTCGA AGACGACTTC CGCTGCCGGC TCGCCGGCAT CGAGCGCTTC GACGGCGACG GCATCATCGC GGACTTCGAC GACCCGGCCG TCGCCGACGC GCTCGCCGGT TCGCCGCTGC CGATCGTCGC GGTCGGCTCG TCATACGAGG ATCCGACGCA GTATCCGGAC GGCGTCCCAT ATATTGCGAC CGACAACCCC AAGCTCGTGT CGCTCGCCTA TACGCACCTG ATCGGCGCGG GGCTCGCGCA TTTCGCGATG TACAGCCTTC CGGCCGCCCA GGAGAATCGC TGGGCGCAGC AGCGCGAGCT CGCCTTCGAC CGGCTCGCGC GCGCGGACGG GCTCGACGCG CCGATCTATC GCGGCGTGTC GACGAGCGCG TCGGGCTGGG ATCATGCGAT CGAGCAGCTG ATCGGCTGGC TGCACGCGCT GCCGAAACCC GTCGGCGTGA TCGCGGTCAC CGATGCGCGC GCGCGGCACC TGCTGCAGGC GTGCCTGATC GCCGGCATCG CGGTGCCGGA ACAAGTCGCG ATCATCGGCA TCGACAACGA TCCGCTCACC CGCACGCTGA CGCGCATTCC ATTGTCGTCG GTCATCCAGG GCACCGAGGA AATGGGCCGC ACCGCCGCGC ACTTGCTGCA CCGGATGCTG CGCGGCGCGC GTTTTCCCGG GCAGCGCATC CTCGTGCCGC CGGTCGGCAT CAACGTGCTC GAATCGACGC GCCACCAGCC GCTCGCGAGC CCGCACGTGA TGCGCGCACG GCATTTCATC CGCCAGTACG CATGCCAGGG GATCAAGACC GAACAGGTCG CCGACTACGT CGGTGTGTCG CGCTCGCTGC TCGAGGAACA CTTCCGGCGC GAGCTGCAGC GCACCGTTCA CCAGGAAATC CTGCGTCACA AGCTCGAGGC CGCGCAGGCG CTGCTCGCGG CCCGCAATGC GTCGAGCGCG GAAGTCGCGA TCCGCTGCGG CTTCACGTCG CTGCAATACA TGTATGCGGT GTTCCGCCGC GAACTCGGCT GCACGCCGCG CGAATACCAG GAACGCACCG CGCCTGCCCA CTGA
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Protein sequence | MNRAPSAQTP HRIALLFNAN KVYDREIISG IGLYLHTTRV VWDLFLEDDF RCRLAGIERF DGDGIIADFD DPAVADALAG SPLPIVAVGS SYEDPTQYPD GVPYIATDNP KLVSLAYTHL IGAGLAHFAM YSLPAAQENR WAQQRELAFD RLARADGLDA PIYRGVSTSA SGWDHAIEQL IGWLHALPKP VGVIAVTDAR ARHLLQACLI AGIAVPEQVA IIGIDNDPLT RTLTRIPLSS VIQGTEEMGR TAAHLLHRML RGARFPGQRI LVPPVGINVL ESTRHQPLAS PHVMRARHFI RQYACQGIKT EQVADYVGVS RSLLEEHFRR ELQRTVHQEI LRHKLEAAQA LLAARNASSA EVAIRCGFTS LQYMYAVFRR ELGCTPREYQ ERTAPAH
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