| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6029 |
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| Symbol | |
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| ID | 6181846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 587487 |
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| End bp | 588659 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689159 |
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| Product | arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_001816018 |
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| Protein GI | 172065306 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0780998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAA GATCGATGTT GCGCTGGAGT ATCTCGACTG CGGCGCTCGC CTGCGTCGAC
CTGGCCGGCA CGCTGCCGGC CGCCGCGCAA GGGGTCGCGC AAGGCGTTGC GCGCGGCGCG
GGTGGCGCCC CGTTGGCGAT GGGCGCGGAC GTGTCGACGC TGCCGGAGCT CGAAGCGCAT
GGCGCGCAAT ACTTCGACCG CGGGCATCCG CGCGACTGCC TGAAGATCCT GCACGCGCAT
GGCGTCGATT CGATCCGCAT CAAGGTCTGG AACGATCCCG GCAACCCGGA CTTCTTCCCC
GCGAACCAGA GCGATGCGGC CGGCTACAAC AATGCCGCAC ACGTCGTGGC GCTCGCGAAA
CGTGCGGCCG CGCTGGGGAT GCGCATCCTG ATCGACTTCC ACTACAGCGA CTGGTGGGCC
GACCCCGGCA AGCAATACCC GCCGCATGCG TGGGCCGGCA AGAATCTCGC CGATACATGC
GCGCTGCTGT CGGCCTATAC GACCGACGTG CTGCGCCAGC TTCAGCGCGC CGGCGTGCGG
CCCGAGTGGG TGCAGATCGG CAACGAGATC ACCGGCGGCA TGCTGTGGCC GCTCGGCCGC
TACGACCAGT GGGACAACCT CGCGCAGCTG CTGAAGACGG GCCGCGATGC GGTGAAGGCC
GTCGATCCGC GCATCAAGGT GATGCTGCAT ATCGACAGCG GCGGCGACAA CGCGAAAAGC
CGCTGGTGGT TCGACAGCGC GACGCAGCGC GGCGTGACGT TCGACGTGAT CGGCCTGTCG
TATTACCCGC AGTGGCAAGG CTCGCTCGAC GACCTGCGCA ACAACGCGAA CGACCTCGCG
GTGCGCTACG ACAAGGAGCT GATCGTCGTG GAAACCGCGT ATCCGTGGAC CACCAGCGAC
GGCGACTCGG AACCGAACGC GATGACGAAC ACCGGCTCGA CCGCGTTCCC GCCGTCACCG
GCCGGCCAGG CGCAATTCCT CGCGGCGGTC GTCGATATCG TGAAGGGCGT GCCGGGCAAT
CGCGGCAAGG GCGTGTTCTG GTGGGAGCCG GAATGGATCC CGACGCCGGG CGTCGGCTGG
AAGGTCGGCG CGGGTGATCA GTGGGACAAC AACACGTGGT TCGACTTCCA CGGCAACGCG
CTGTCGTCGC TCGACGCGTT CCGCCGGCGC TGA
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| Protein sequence | MNRRSMLRWS ISTAALACVD LAGTLPAAAQ GVAQGVARGA GGAPLAMGAD VSTLPELEAH
GAQYFDRGHP RDCLKILHAH GVDSIRIKVW NDPGNPDFFP ANQSDAAGYN NAAHVVALAK
RAAALGMRIL IDFHYSDWWA DPGKQYPPHA WAGKNLADTC ALLSAYTTDV LRQLQRAGVR
PEWVQIGNEI TGGMLWPLGR YDQWDNLAQL LKTGRDAVKA VDPRIKVMLH IDSGGDNAKS
RWWFDSATQR GVTFDVIGLS YYPQWQGSLD DLRNNANDLA VRYDKELIVV ETAYPWTTSD
GDSEPNAMTN TGSTAFPPSP AGQAQFLAAV VDIVKGVPGN RGKGVFWWEP EWIPTPGVGW
KVGAGDQWDN NTWFDFHGNA LSSLDAFRRR
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