| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6022 |
|---|
| Symbol | |
|---|
| ID | 6181839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 578508 |
|---|
| End bp | 579521 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641689152 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001816011 |
|---|
| Protein GI | 172065299 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACGC TCGCGCAAGT CGCGCGGCGC GCGAACGTCA CCGCAGCGAC CGTCTCGAAC
GTGTTGCGCA ATCCGCAGAA GGTGAAGCCG GCGACCGTCG AACGCGTGAT GGCGGCGATC
CGCGAACTCG GCTATCGGCC GAATCTCACC GCGCGGGCGC TCGCCGAAGG CCGCACGTCG
ACGCTCGCGC TGATGCTGTC GAACATCACG AACCCGTTCT ATCCGGAGTT CGTGCTGGCT
GCCGAGCGCG AGGCGCGCAA GCGCGGCCAC TACCTGCTCG TGTCCAATAC CGACGACGAT
CCGGCGATCA CGCGCAACTA CCTCGAGCGG ATCGCGGGAA CGCTCGCGGC CGGCGCGATC
GTGATGAACA CCGATCTCGC CGAAGCCGAA CTCGCCGACA TCGCGCGTCA CGGCGCATCG
ATCGTGCTGT GCATGTGGGA GCACGTGCAT GCGTCGCGCA CGCTGCCGTG CGTGACCGTC
GATTTCGCGG CGGCGGGCGC GCTGGCGGCC GCGCATCTGT CCGGGTTACG GCATCGCACG
TTCGGCGCGC TGGTCGGCAA GGGCTCGGGC GGCCCGCAGT CGGTGCGGCT GCGCGGTTTC
GCCGACGAAC TCGCGGCACG CGGCCATCCG GCGGACGCGC TGACGACCGT GTCGGCGCAC
GATTCGATCG AAGGCGGCTA CGAAGCGGCC GCTGCGCTGC TGCGCGCGAA GCCCGGCCTC
ACCGCGCTGT TCGCGACCAA CGACCTGATG GCGATCGGCG CGATGCAGGC GGCCGCCGAT
CTCGGCCTGC GCGTGCCGGC CGATCTGTCG GTGGTCGGCA TGACCGATAT CCAGCTCGCC
CACCAGTTCC GCCCTGCGCT GACGACGGTG CGGTTCCCGA CGTCGCAGAT CGCCGCGCGG
GCGATCGCGC TGACGCTCGA CATGATCGAC GGGATCGAAC CGGCCGCGGC CGTGCATACG
ATCGGTGCGC CGGAACTCGT GGTGCGGGAG TCGACGGGGG TGGCGCCGGG GTGA
|
|---|
| Protein sequence | MVTLAQVARR ANVTAATVSN VLRNPQKVKP ATVERVMAAI RELGYRPNLT ARALAEGRTS
TLALMLSNIT NPFYPEFVLA AEREARKRGH YLLVSNTDDD PAITRNYLER IAGTLAAGAI
VMNTDLAEAE LADIARHGAS IVLCMWEHVH ASRTLPCVTV DFAAAGALAA AHLSGLRHRT
FGALVGKGSG GPQSVRLRGF ADELAARGHP ADALTTVSAH DSIEGGYEAA AALLRAKPGL
TALFATNDLM AIGAMQAAAD LGLRVPADLS VVGMTDIQLA HQFRPALTTV RFPTSQIAAR
AIALTLDMID GIEPAAAVHT IGAPELVVRE STGVAPG
|
|---|
| |