Gene BamMC406_6013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6013 
Symbol 
ID6181898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp569128 
End bp570357 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content69% 
IMG OID641689143 
Productcarboxymethylenebutenolidase 
Protein accessionYP_001816002 
Protein GI172065290 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAC GACACATCGA GATCCCCTCG CCGGACGGCG GGGCGTTTCG CGCGTACCTG 
AGCACGCCGG CCGGCGGCAC CGGGCCGGGC ATCGTGCTGT GTCACGAGAT CTTCGGCGCG
AACGCGACCA TGCGCGACGT GGCCGATTAT TACGCCGAGG AAGGCTACAC GGTGCTCGTG
CCCGACCTGT TCTGGCGCCA GGCGCCCGGC CTCGAACTCG GCTACACCGC GGCCGACGCC
GAGCGCGCGA TGGCGCTGTA CCGCGAGTAC GACGAAAACA AGGGCGTCGA GGATGTCGCC
GCCGCGCTGG CCGTGCTGAC GCAACGGCCG GAATGCACGG GGCGGGCCGG CGTGCTCGGC
TACTGCCTCG GCGGCAAGCT CGCGTATCTC GCCGCGTGCC GGCTGCCGGA CGTGGCGGCC
GCCGTCTGCT ATTACGGCGT GGGGATCGAA CAGGCGCTCG ACGAAGCCGC TCACCTGCGC
GGCCGCCTCG TGCTGCAGAT CGCCGCGCAG GACCGCTTCT GCCCGCCCGA CGCGCAGCAG
CGCATCGCCG CCGCGCTGGC GGGGCGCGAT GGCGTCGAGG TGTACGTATA CCCGGGCGTC
GATCATGCGT TCGCGCGCAT CGGCGGCGAT CATTTCGACA AGGCGGCCGC GATCATGGCG
CACCAGCGCG CGATCGCCGC GTTCCGCGCG GCGCTCGGCC CGCACTACGA CCTGTCCGCC
CTGTGGGAAG AGCATCTGCG CCACGAGTTC GACACGCGCA ACGTCGACGC GACGATGGCC
ACGATGGTCG CGCAACCCTA CGTGAACCAT ATCCCGACGC TGACGGGCGG CGTCGGCCAC
GACGAGCTCA AGCGCTTCTA CACGCATCAC TTCGTGCATG CGAACCCGCC GGACACGACG
ATCACGCCGA TCTCGCGCAC GATCGGCGCG AGCCAGATCG TCGACGAGCT GCTGTTCTGC
TTCACGCACA CGACGGAGAT CGACTGGATG CTGCCCGGCG TCGCGCCGAC CGGGAAGCGC
GTCGAGATTC CGCTCGTCGC GATCGTCAAG TTCCGCGGCG ACAAGCTGTA TCACGAACAC
ATCTATTGGG ACCAGGCGAG CGTGCTCGTG CAGCTCGGCC TGCTCGACGC GGCCGGGCTG
CCCGTCGCCG GTGTCGAAAC GGCGCGGAAG CTCCTCGACG AAACCGTGCC GTCGAACGGA
CTGATGCAGC GCTGGCACGA CAGCGCGTGA
 
Protein sequence
MKGRHIEIPS PDGGAFRAYL STPAGGTGPG IVLCHEIFGA NATMRDVADY YAEEGYTVLV 
PDLFWRQAPG LELGYTAADA ERAMALYREY DENKGVEDVA AALAVLTQRP ECTGRAGVLG
YCLGGKLAYL AACRLPDVAA AVCYYGVGIE QALDEAAHLR GRLVLQIAAQ DRFCPPDAQQ
RIAAALAGRD GVEVYVYPGV DHAFARIGGD HFDKAAAIMA HQRAIAAFRA ALGPHYDLSA
LWEEHLRHEF DTRNVDATMA TMVAQPYVNH IPTLTGGVGH DELKRFYTHH FVHANPPDTT
ITPISRTIGA SQIVDELLFC FTHTTEIDWM LPGVAPTGKR VEIPLVAIVK FRGDKLYHEH
IYWDQASVLV QLGLLDAAGL PVAGVETARK LLDETVPSNG LMQRWHDSA