Gene BamMC406_6006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6006 
Symbol 
ID6181891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp562480 
End bp562998 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID641689136 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001815995 
Protein GI172065283 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0816283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.470974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC CGGTCCGGAT GACGATCAAC GGCAAGCCCG TCGAAGCAGA CGCCGCCGAC 
GGCGACATGA ACCTCATCGA CTTCCTGCAC GAGCGGCGGG ACCTGACGGG CACGAAGCTG
TGCTGCGGCA TCGGCGTGTG CCGCGCGTGC ACGGTCGGCG TGCGTAACAC GCCCGATGCG
CCGATGGAAA AGACGCTGTC GTGCTCGACG CCGGTCAGCG CGATGGCGAA CATGCACGTG
TACACGATCG AAGGGCTCGC GCAGGGCGGC GCGCTGTCGC CCCTGCAGCA GAGCTTTCTC
GAGTCGTTCG CGTTCCAGTG CGGCTACTGC GCGTCGGGCT TCCTGATGGC CGCGACCGCG
ATGCTCGACC ATCTGCGCGC GCAGCCGGTG CACGAGCGCG ATCTGGACAC GATGATCGAA
ACCTGGGTCG GCGGCAACAT CTGCCGTTGC ACCGGCTACG TCAAGTACAT CGAGGCCATT
CGCAAGGTGG CGCTGCGCTA CACGAAGGGG GCGGCATGA
 
Protein sequence
MSNPVRMTIN GKPVEADAAD GDMNLIDFLH ERRDLTGTKL CCGIGVCRAC TVGVRNTPDA 
PMEKTLSCST PVSAMANMHV YTIEGLAQGG ALSPLQQSFL ESFAFQCGYC ASGFLMAATA
MLDHLRAQPV HERDLDTMIE TWVGGNICRC TGYVKYIEAI RKVALRYTKG AA