| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6004 |
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| Symbol | |
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| ID | 6181889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 558196 |
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| End bp | 559170 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689134 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001815993 |
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| Protein GI | 172065281 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC TGAGCGTAAT ACATACCGTG ATGCTGGCCG GCTTGTTCAT CTTCGTCGCC
GGCGGCGTGC TGGCCGCGAT GCTGCTGTTT GCGCCGCGCA ACATCGAGCG CCGGATTCAA
CAGGCGAGCG GTGCAAGTGT GGGCATCGGC GGCGGTGCGG ACGGCGGCGA CGGGCAAACG
TCGCGCTGGA TCGCGAAATT CGTCGAGCTG TCGCAACCGA TCTCCCGGCT GTCGGTGCCG
CAAGAGGGCT GGGAAAATTC CCCGCTGCGG ATCCGGCTGA TGAATGCCGG CTGGCGCAAT
CCGAACGCGG GCGCGCTTTA CTTCGCGGCG AAGACGGTGC TCGCGCTGGC GCTGCCTGGC
GCGGCGCTGC TGGCGCTCGC CACGACGCGG CTCGCGGATC AGCGCATGCT GCTGTCGTTC
ATTCTCGTCG CGCTCGCCGG GATCGGCTAC TACGTGCCGA ATGTGATCCT CTCGCGGCGG
ATCGCGACAC GTCAGCGGGT GATCTTCGAG GATTTCCCGG ATGCGCTCGA CTTGCTGACC
GTCTGCGTCG AAGCCGGGCT CGGGCTCGAT GCGGCGCTGA TGCGGGTGAG CGAGGAACTG
CGCTTTCGCA GCGAAGTGGT CTCGGGCGAG CTCGACTTGC TGCTGCTCGA GATGCGTTCC
GGGTTCACGA AGGAAACCGC GCTGCGCAAT TTCGCGCTGC GCACCGGCAC CGAGGATATC
GAATCGTTCT GCGCGATGCT GATCCAGGCC GACCGCTTCG GCACGAGCAT CGCCGAATCG
CTGCGCGTGC TGTCCGACAT GCTGCGCACG CGGCGGCGGA TGCGCGCCGA GGAACGGGCC
GCGAAGATCG CGCTGAAGCT GCTGTTCCCG CTGATCTTCA ACATCTTCCC GGCGCTCATG
TGCGTGTTGC TCGGCCCGGC GATGATTCAC GTGTATCGCG TGCTGCTGCC GTCCCTCGCC
AGCATCGGAC ACTGA
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| Protein sequence | MQNLSVIHTV MLAGLFIFVA GGVLAAMLLF APRNIERRIQ QASGASVGIG GGADGGDGQT
SRWIAKFVEL SQPISRLSVP QEGWENSPLR IRLMNAGWRN PNAGALYFAA KTVLALALPG
AALLALATTR LADQRMLLSF ILVALAGIGY YVPNVILSRR IATRQRVIFE DFPDALDLLT
VCVEAGLGLD AALMRVSEEL RFRSEVVSGE LDLLLLEMRS GFTKETALRN FALRTGTEDI
ESFCAMLIQA DRFGTSIAES LRVLSDMLRT RRRMRAEERA AKIALKLLFP LIFNIFPALM
CVLLGPAMIH VYRVLLPSLA SIGH
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