Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6001 |
Symbol | |
ID | 6181886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 554551 |
End bp | 555759 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641689131 |
Product | response regulator receiver protein |
Protein accession | YP_001815990 |
Protein GI | 172065278 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.188719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATA TCCTCGTAGC CGCCGACGAT ACCGCCCGGC TCATGCAGAT CGCGCGTCTG GTCACCGACA GCGGACACTA TCGCGTGACA CGTGCGCACG GTCGGCCGTC CCAGATCGAG CATCGCACCG ATGGACTCGA TTCATTCGAT ATCCTTCTGA TCGACGGCGC ATTGGCCGAT GCGGCCGAGC TGTCGGCGAT CGAGCGGATC TGCCGGCTGC ACCCGTGCCT GATCGGCATC CTGGTGACCG CGGATGCGGC GCCGCATGTG CTGCTGGACG CGATGCGCGC CGGCGCGCGC GACGTGCTGC AGTGGCCGAT CGATCCGGCC GCCCTCGCCC GCGCGCTCGA ACGCGCCGCC GCGCAAAGCA CGCGGCGCGA CGGCGGAGAC ACGCGCTTCG TGTCGTTCAT GTCGTGCAAG GGCGGCGCGG GCACCAGCTT CGCCGCGAGC AACGTCGCGT ACGAGATCGC CGAAGCCCAC AAGCGCCGCG TGCTGCTGGT CGATCTGAAC CAGCAGTTCG CGGATGCCGC GTTCCTCGTC AGCGACGAAA CGCCGCCGTC GACGCTGCCG CAGCTCTGCG CGCAGATCGA GCGGCTCGAC GGCGCGTTTC TCGACGCGAG CGTCGCGCAC GTGACGCCGA CCTTCCACGT GCTGGCGGGC GCGGGCGACC CGGTCAAGGC CGCCGAGATG CGCGAGGATG CGCTCGAATG GATCCTCGGC GTCGCGGCGC CGCGCTACGA CTTCGTGATC TTCGACATCG GCGTGAGCAT CAATCCGCTG TCGATGATCG CGCTGGATCG CAGCGACCAG ATCCATCTCG TGCTGCAGCC CGCGATGCCG CACGTGCGCG CGGGCCGCCG GCTGCTGGAG ATTCTCGTGT CGCTCGGCTA CCCGGTCGAC CAATTGCGGC TGGTGGTGAA CCGGATGACG CGCGCGGGCG AACGGTCCCG CGCCGCACTC GAGGAAGTGC TCGGCCTGCA TGCCAGCTGC ACGATACCCG ACGATGCCGA CACGGTGCGC GAAGCGCTCG ACCTGGGGCA TCCGGCCTCG CGCGTCGCAC GTGGCGCCGC GGTGACGCGG GCATTGCAGG CCTGCGCGAA GCAGATCGTC GAAGGGGACG TGCGCACGCG GCACGGCACG TCCAGCAGCG AACCGTTGAT GTCCCGGCTG TTCGGCCGCA AGGCCACGCC GAAGCTCAAG TCCATGTGA
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Protein sequence | MINILVAADD TARLMQIARL VTDSGHYRVT RAHGRPSQIE HRTDGLDSFD ILLIDGALAD AAELSAIERI CRLHPCLIGI LVTADAAPHV LLDAMRAGAR DVLQWPIDPA ALARALERAA AQSTRRDGGD TRFVSFMSCK GGAGTSFAAS NVAYEIAEAH KRRVLLVDLN QQFADAAFLV SDETPPSTLP QLCAQIERLD GAFLDASVAH VTPTFHVLAG AGDPVKAAEM REDALEWILG VAAPRYDFVI FDIGVSINPL SMIALDRSDQ IHLVLQPAMP HVRAGRRLLE ILVSLGYPVD QLRLVVNRMT RAGERSRAAL EEVLGLHASC TIPDDADTVR EALDLGHPAS RVARGAAVTR ALQACAKQIV EGDVRTRHGT SSSEPLMSRL FGRKATPKLK SM
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