Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_5995 |
Symbol | |
ID | 6181947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | + |
Start bp | 549000 |
End bp | 549845 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641689125 |
Product | Flp pilus assembly protein CpaB |
Protein accession | YP_001815984 |
Protein GI | 172065272 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0325272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACA GTCGAGCGGT CATGATGCTG ATCATCGCGA TGGTCGCGGG GCTTGCCGCG GTCGTGTTCG CGTCTCGCTG GTTGATGAAT ACCTCCAGCA GCTCGGTCAC GTCGGTCGCG GTGGCGACCA CCGACCTGAA CCTGGGCGAG CCGCTCGGGC CGAACCAGAT CCACATGGTG AGCTGGCCGT CCGGCAGCGT GCCGACCGGC GCGTTCGCCG ACACGAAGGA GCTCGAAGGG CGCGTCGTAC GCACGAGCCT CGCCCGCGGC GAGCCGGTGA TCGAGTCGAA GCTCGCGCCG GTCGGCACGA AGGGCGGATT GTCAGCGGTG ATCGCCGACG GCAGCCGCGC GATCACCGTG CGCGTGAACG ACGTGGTCGG CGTCGCGGGC TTCGCGCTGC CGGGCAACTA CGTCGACGTG ATCGTCAACA CGCAGGAACA GCAGGGCAAG ACCGACGGGC AGAGCATCTC GAAGATCGTG CTCGAGCACA TCCTCGTGCT CGCCGTCGCG CAGCAGGTCA GCCGCGACGA CACCGCACCG AAGGTCGTCA ACGCGGTGAC GCTCGAAGTC ACGCCCGATC AGGCCGAACG CCTCGATCTC GCGCGCAGCG TCGGCACGCT GTCGCTCGTG CTGCGCAACC AGGTCGACCA GAAGACGCTG ACCACCGACG GCGCAACCAA GCTGACGTTG CTCGGCAAGG CGCCGGTACC CGACGCGACG CCCGCACCGG CACCCGCGCA CGTACGGACC GTGCGCGTGC ATGTCGCGTC GCACGCCGCA CCAGAAGCGC GTCGCGATTG CGTTGGTGTG CTGACCGGTG TGCACGGCAG CGTCGAATGC TTCTGA
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Protein sequence | MKNSRAVMML IIAMVAGLAA VVFASRWLMN TSSSSVTSVA VATTDLNLGE PLGPNQIHMV SWPSGSVPTG AFADTKELEG RVVRTSLARG EPVIESKLAP VGTKGGLSAV IADGSRAITV RVNDVVGVAG FALPGNYVDV IVNTQEQQGK TDGQSISKIV LEHILVLAVA QQVSRDDTAP KVVNAVTLEV TPDQAERLDL ARSVGTLSLV LRNQVDQKTL TTDGATKLTL LGKAPVPDAT PAPAPAHVRT VRVHVASHAA PEARRDCVGV LTGVHGSVEC F
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